Gene Svir_33980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33980 
Symbol 
ID8388722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3700366 
End bp3700548 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content66% 
IMG OID644977420 
ProductProtein of unknown function (DUF2530) 
Protein accessionYP_003135189 
Protein GI257057357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0391839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAG GCACAGCACT CTGGCTGATC GCCTTCGTCG TGCTACTGCT CACGGGCGTC 
CACGGCGTGT GGCTGTGGAC AACCCTGGCG GGGGGCGGGC TCGGCCTGGT GGGCATGGCA
ATCATGGTGT GGCAGCGAGC CGCATCCCGC AGAGGGTCGC GTTTTGCCCA GCGAAATCTT
TAG
 
Protein sequence
MIGGTALWLI AFVVLLLTGV HGVWLWTTLA GGGLGLVGMA IMVWQRAASR RGSRFAQRNL