| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33830 |
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| Symbol | |
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| ID | 8388707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3679765 |
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| End bp | 3681471 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644977405 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003135174 |
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| Protein GI | 257057342 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACGA CGGTGACGGT CAGCGACGGT GTGCGGTTGG CGGTGCGCGT ACACGGCCCC
CAGGACGCGC CCACGCTCGT GTGTGTGCAC GGATACCCGG ACAACGCCGC GCTGTGGGAC
GACGTACGGC GGCACCTCCC GCAGTTCCGT GTCGTCACCT ACGACGTGCG CGGCGCCGGC
GACTCGGATC GGCCCCGGCG ACGGGAGGCC TACCGGCTCG ACCGACTCGC CGAGGATCTG
CGGTCCGTGA TCGAGGCGAC CTCGCCCGAC CGACCCGTGC ACCTGCTCGC CCACGACTGG
GGTTCCATCC AGGCCTGGCA CGCGGTGGCC GGTCCGTGGC TGCGCGGCAA GGTCGCGTCG
TTCACCTCGA TCTCCGGGCC GTCGCTGGAC CACGCCTTTC GGTGGTTGCG TTCGGGGCTG
CGGCGCCCCC GGCGACTTCC CGCCGTGCTC CGGCAGCTGG CCCGATCGAC CTACATCGGT
TTCTTCCAAC TGCCCGGCCT GCCCGAACTG GCGTGGCGCA CCGGACTTGT CACCGCCTTG
GTGCGCAGCA GAGAACCCGC CGAACCGGCA CCGGTCGTCG CCGATGCCGT GGCCGGCCTC
AACCTCTACC GCGCCAACAT GCCGCGCGCC CTCGGGCGAC GTGGGACACC ACGCCCGGTG
GACGTCCCCG TGCAGGTGCT CGCGCCCCGG GCCGACCCGT TCGTCGGCGT GCCATTGCAG
ACCGAACTCG GCTCCTGGGT GCCGGACTTG CGAGTGCGGT GTGTTCCCGG CGGTCACTGG
GTGGTCCGTG CCGACCCCGC ACGGATCGCC GCCGCCACGG CCGAGTTCGT GACCCACGTC
GAAGGAGGGC CCGAGACACG GCGGTTGCGT CGTGCCCGCC GGAACCGGTC CGCGCAGGGC
AGATTCGACG GTCGACTGGT CGTGATCACC GGCGCGGGTA AGGGGATCGG CCGCGCCACC
GCACTGGAGT TCGCGCGGGA ACGCGCCGAG TTGGTGCTCG TCGACATCGA CCCCGGCTCC
CTCGCCAAGA CGGCCGACGA GGTCCGCGGG TTCGGTGTCG AGGTGACGAC CCACCGGGTC
GACGTCGCCG ACGGCGAGGC CATGCGCGCA CTCGTCGACA CCGTGGTCGC CGAACGCGGC
GTACCCGACG TCGTGGTGAA CAACGCGGGT GTCGGGCTCG CCGGTCCCGT CCTCGACACC
ACCGAGGACG AATGGCGGCG CCATCTCGAC GTGAACTTCT GGGGGGTGCT CCACGGGTGC
CGCCTGTTCG CGGCGAGGAT GGTCGAACGC GGCGAAGGTG GCCACCTGGT CAACATGGCC
TCGATGGCGG CTTACCTGCC GAACGCGGTC CTGCCCGCGT ACTCCACCGG CAAGGCCGCC
GTCCTGATGC TCAGCGAGAG TCTGCGTGCC GAACTGGGTG TGTTCGGTAT CGGCGTCAGC
GCCGTGTGCC CCGGCTTCGT GGCCACGGAC ATCGTGCGGA CGACCCGGTT CGCCGGCACC
GACGAACTCG AACAGCAACG CAGGCGGCGC AGGGCACAGC GGCTGTTCAC GGCACGCAAC
GTCCGGCCCG AACTCGTCGC GAAGGCCGTG TTGCGGGCGG TGGAGCGGGA CCTCGCCGTG
GTGACCCCGA CCGTGGAGGC GAAGGCCGCG CGCCTGCTCG CCCGGTGGGC TCCCGGACTG
GTGCGCGCGG CCCTGCGTAG CCGGTGA
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| Protein sequence | MRTTVTVSDG VRLAVRVHGP QDAPTLVCVH GYPDNAALWD DVRRHLPQFR VVTYDVRGAG
DSDRPRRREA YRLDRLAEDL RSVIEATSPD RPVHLLAHDW GSIQAWHAVA GPWLRGKVAS
FTSISGPSLD HAFRWLRSGL RRPRRLPAVL RQLARSTYIG FFQLPGLPEL AWRTGLVTAL
VRSREPAEPA PVVADAVAGL NLYRANMPRA LGRRGTPRPV DVPVQVLAPR ADPFVGVPLQ
TELGSWVPDL RVRCVPGGHW VVRADPARIA AATAEFVTHV EGGPETRRLR RARRNRSAQG
RFDGRLVVIT GAGKGIGRAT ALEFARERAE LVLVDIDPGS LAKTADEVRG FGVEVTTHRV
DVADGEAMRA LVDTVVAERG VPDVVVNNAG VGLAGPVLDT TEDEWRRHLD VNFWGVLHGC
RLFAARMVER GEGGHLVNMA SMAAYLPNAV LPAYSTGKAA VLMLSESLRA ELGVFGIGVS
AVCPGFVATD IVRTTRFAGT DELEQQRRRR RAQRLFTARN VRPELVAKAV LRAVERDLAV
VTPTVEAKAA RLLARWAPGL VRAALRSR
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