Gene Svir_33730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33730 
Symbol 
ID8388697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3668425 
End bp3668766 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID644977395 
Productextracellular polysaccharide biosynthesis protein 
Protein accessionYP_003135164 
Protein GI257057332 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGC AGAACAGTAA CGCGTTCCGA GTGATGGTGC GCATGCAGGT CGAACAAGGT 
CTGGAGAAGG ATTTCGAACG AGCATGGCAG GAGGTCGGTG ACTCGGTCGC CCGGAACCCG
AAGAACCTCG GCCAGTGGCT GTCCCGTTCC CTCACCGAGG AGGGGATCTA CTACCTCATC
AGCGACTGGG TCGACGAACC CAGCTTCCGC GAATTCGAGA AGAGCGACGC GCACCGTGTG
CACCGTGAGC AGCTGAACCC GTACCGCTCG GGCAAGTCGA TGGTGCCCAT GCAGGTGGTC
GCGCAACGGG CCGGCAACAC CGAGGGAGCG AACCATGGCT GA
 
Protein sequence
MSRQNSNAFR VMVRMQVEQG LEKDFERAWQ EVGDSVARNP KNLGQWLSRS LTEEGIYYLI 
SDWVDEPSFR EFEKSDAHRV HREQLNPYRS GKSMVPMQVV AQRAGNTEGA NHG