Gene Svir_33500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33500 
Symbol 
ID8388674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3645286 
End bp3646455 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content69% 
IMG OID644977372 
Producthypothetical protein 
Protein accessionYP_003135141 
Protein GI257057309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.178585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.421552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGAAC GGGTGCCGGA ACTCGAGCTG GGTGTCTCAC CGACGGCCGG ATGGCGGGAG 
AGCGTGGGAC ACGGATTCCG CGTGCGGACC CGGGCGCCGG GTTTCGTGGT GGGTGTCGCC
ACGGCCCTGG CGGCGTTGAT CGGGTACGTG GGACTGCACG GATGGCTGGC CACACCCACC
TCCGACGGGG TCACGATCGG CCTCATCGGA CAGGCGACAG CGATCGGTGA CTCGCTACGC
GCGGTCGCCT CCGAACTCGA CGCCGAGGTC ACCGTCATCC CCTACCGGGA CCCCGAACGG
GCACGTCGGG AGGTCGCCGA CGGCAGACTG GACGTCCTCG TCTCCGGCAG TACGTCGGAT
CTGCGCGTAC TTTCCGGCTC CTCAGTGGAC CCGTTCGTCC GCGCTGTGCT CACCGGCATC
TCGCGCGATG TGGTGCTGGA AGCGAAACTC GCGGAGATCG GACTCGATCC CACGGATGTG
CGCCGGGAAC TGGACGCGAC GGACGTGCGG GTGACCGTGT CGGAGTCCGT GTCGCATCGA
CATCGACCCG TGCTCGCGAT GGTGCTGTCG TTCGCGGTGT TCACCGCGAT CGCGACGCAC
GGGACCCATG CGGCACGGCG GGTGGTGACC TGGGCGTCCG AACAGTGCGC CGCGCCGGGT
CGGCAGGCAC TGTTCGGAAT GCTCGGCGGA GTGGGCCTGG CCGGACTGGT CCAGTTCGCG
GCTGTCGGTG TGGTCTCCGT CGGGGCGCTC TCGGTGGCCG GGGTTCCGGG TGATGTCGGT
GTCGACGTCC TGGCGGAGGC TCTGTCGTGG GGTCTGCTGT GTTACACGCT GGGTTTCGCC
CTGTACTCGA CGGTGTTGAC GACCGTGTGG CTTCGCCGTG ACGCGGGCCC CCGACCGCAC
CCCCTATCCG CGATGCCGTG GCTGCTGGGG GCGTTCACCG TGAGTGTGGT GGTACTGCGC
CTACCGGGGA ATGCGACGTC GACGGTGTTG TCGTCACTGC CCTTGCTGTC CCCGACGAGC
CTGCCGGGCC GCATCGTCAC GGACATCGTG TCCCCCGCCG AGGTCACGGC AGCGATCCTG
CTCCTGGCCG CGACCGTCGT CGTGTCACTG TGGCTGCTCG ATAAGACCCG ACGGCCGAAG
CCCCATCCCT ACATCGAGCT CGGCGGATAG
 
Protein sequence
MSERVPELEL GVSPTAGWRE SVGHGFRVRT RAPGFVVGVA TALAALIGYV GLHGWLATPT 
SDGVTIGLIG QATAIGDSLR AVASELDAEV TVIPYRDPER ARREVADGRL DVLVSGSTSD
LRVLSGSSVD PFVRAVLTGI SRDVVLEAKL AEIGLDPTDV RRELDATDVR VTVSESVSHR
HRPVLAMVLS FAVFTAIATH GTHAARRVVT WASEQCAAPG RQALFGMLGG VGLAGLVQFA
AVGVVSVGAL SVAGVPGDVG VDVLAEALSW GLLCYTLGFA LYSTVLTTVW LRRDAGPRPH
PLSAMPWLLG AFTVSVVVLR LPGNATSTVL SSLPLLSPTS LPGRIVTDIV SPAEVTAAIL
LLAATVVVSL WLLDKTRRPK PHPYIELGG