Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33500 |
Symbol | |
ID | 8388674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3645286 |
End bp | 3646455 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977372 |
Product | hypothetical protein |
Protein accession | YP_003135141 |
Protein GI | 257057309 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.178585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.421552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGAAC GGGTGCCGGA ACTCGAGCTG GGTGTCTCAC CGACGGCCGG ATGGCGGGAG AGCGTGGGAC ACGGATTCCG CGTGCGGACC CGGGCGCCGG GTTTCGTGGT GGGTGTCGCC ACGGCCCTGG CGGCGTTGAT CGGGTACGTG GGACTGCACG GATGGCTGGC CACACCCACC TCCGACGGGG TCACGATCGG CCTCATCGGA CAGGCGACAG CGATCGGTGA CTCGCTACGC GCGGTCGCCT CCGAACTCGA CGCCGAGGTC ACCGTCATCC CCTACCGGGA CCCCGAACGG GCACGTCGGG AGGTCGCCGA CGGCAGACTG GACGTCCTCG TCTCCGGCAG TACGTCGGAT CTGCGCGTAC TTTCCGGCTC CTCAGTGGAC CCGTTCGTCC GCGCTGTGCT CACCGGCATC TCGCGCGATG TGGTGCTGGA AGCGAAACTC GCGGAGATCG GACTCGATCC CACGGATGTG CGCCGGGAAC TGGACGCGAC GGACGTGCGG GTGACCGTGT CGGAGTCCGT GTCGCATCGA CATCGACCCG TGCTCGCGAT GGTGCTGTCG TTCGCGGTGT TCACCGCGAT CGCGACGCAC GGGACCCATG CGGCACGGCG GGTGGTGACC TGGGCGTCCG AACAGTGCGC CGCGCCGGGT CGGCAGGCAC TGTTCGGAAT GCTCGGCGGA GTGGGCCTGG CCGGACTGGT CCAGTTCGCG GCTGTCGGTG TGGTCTCCGT CGGGGCGCTC TCGGTGGCCG GGGTTCCGGG TGATGTCGGT GTCGACGTCC TGGCGGAGGC TCTGTCGTGG GGTCTGCTGT GTTACACGCT GGGTTTCGCC CTGTACTCGA CGGTGTTGAC GACCGTGTGG CTTCGCCGTG ACGCGGGCCC CCGACCGCAC CCCCTATCCG CGATGCCGTG GCTGCTGGGG GCGTTCACCG TGAGTGTGGT GGTACTGCGC CTACCGGGGA ATGCGACGTC GACGGTGTTG TCGTCACTGC CCTTGCTGTC CCCGACGAGC CTGCCGGGCC GCATCGTCAC GGACATCGTG TCCCCCGCCG AGGTCACGGC AGCGATCCTG CTCCTGGCCG CGACCGTCGT CGTGTCACTG TGGCTGCTCG ATAAGACCCG ACGGCCGAAG CCCCATCCCT ACATCGAGCT CGGCGGATAG
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Protein sequence | MSERVPELEL GVSPTAGWRE SVGHGFRVRT RAPGFVVGVA TALAALIGYV GLHGWLATPT SDGVTIGLIG QATAIGDSLR AVASELDAEV TVIPYRDPER ARREVADGRL DVLVSGSTSD LRVLSGSSVD PFVRAVLTGI SRDVVLEAKL AEIGLDPTDV RRELDATDVR VTVSESVSHR HRPVLAMVLS FAVFTAIATH GTHAARRVVT WASEQCAAPG RQALFGMLGG VGLAGLVQFA AVGVVSVGAL SVAGVPGDVG VDVLAEALSW GLLCYTLGFA LYSTVLTTVW LRRDAGPRPH PLSAMPWLLG AFTVSVVVLR LPGNATSTVL SSLPLLSPTS LPGRIVTDIV SPAEVTAAIL LLAATVVVSL WLLDKTRRPK PHPYIELGG
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