Gene Svir_32450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32450 
Symbol 
ID8388569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3519791 
End bp3520798 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content72% 
IMG OID644977272 
ProductABC-type metal ion transport system, ATPase component 
Protein accessionYP_003135043 
Protein GI257057211 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.959297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATCA CTGTCGAGAA CGTCAGCAAG TCTTTCCCCG GGACGACCGC TCCCGTCGTG 
GCGTTGCGGG ACGCCACCCT CTCCGTCAGT GCGGGTTCGT TGTTCGGCAT CCTCGGCCCG
GCGCGTTCCG GGAAGACGAC CCTCGCGCGG TGCGTGGCGC TTCGGGAACG TCCAGACCGG
GGTGTCGTGC GTTACGACGG CATGGACACC AGCAAGCTCA CGGGTCGTCG GTTGTGGGGC
GCGCAGCGGC AGGTGGGGGT GGTCAATCCC GCGCTGCGGC CCGAACGCAC GGTCGCCGGG
AACGTCGCCG CCCCGCTGGA GCACATGGGC GTGGAGCCCG CTCGGCGTAA GCAGCGGGTC
GGTGAGCTGC TCGACGTGAT CGGGTTGTCT CGTTCGGGCG CTCGTCTGCC GTCCGAACTG
TCCCCCGGTC AGCAGCGTCG GGTGGCCGTC GCGAGGGCGC TGGCGACGGC GCCGTCGGTG
TTGTTCGCCG ACGACCCCAC CGCCGGTGTG CACGGTGACG AGTCGGCGGC GGTGCTGTCC
GTGCTCGACC GAGCCAGGGC GGAGTTGGGC GCGACCGTGG TCATCACCAC CCGCGACGCC
GATGTCGCCC GCCGGGTCTG CGACGAGGTG GCGCTGCTGG ACCGCGGGAC GGTGGTCGAG
TCGGGCACCC TCCTCGGCCT GTTGGGTAAG CCGGGGAGTC AGCTCGCCGA GGCCGTGTTG
CCGCCGCTCA CCACGCCCCG GGCCCACCTT GCGACCTACG ACCGTGCCGT GGACGTCGTC
CTCGTCGGGT TCGCCGCCGT GGGGGCGCTG CTGCCGGAGG CGTCGGCCCG GTTCGACGTC
GACTTCACCA CCATCGGCGG GGGGCTGACC CGGCTGGGTG ACACGCCGGT GGCGCGGTTC
CGGCTCGGCG TGGAAGGTCA GCGCGCCGAC GCCGCGCTCG CCTGGATCGC CGAACGGGGC
GCGCACGTCA GCACCCCCAT GTACGGCTTG CGCGACGTCG CTGCCTGA
 
Protein sequence
MVITVENVSK SFPGTTAPVV ALRDATLSVS AGSLFGILGP ARSGKTTLAR CVALRERPDR 
GVVRYDGMDT SKLTGRRLWG AQRQVGVVNP ALRPERTVAG NVAAPLEHMG VEPARRKQRV
GELLDVIGLS RSGARLPSEL SPGQQRRVAV ARALATAPSV LFADDPTAGV HGDESAAVLS
VLDRARAELG ATVVITTRDA DVARRVCDEV ALLDRGTVVE SGTLLGLLGK PGSQLAEAVL
PPLTTPRAHL ATYDRAVDVV LVGFAAVGAL LPEASARFDV DFTTIGGGLT RLGDTPVARF
RLGVEGQRAD AALAWIAERG AHVSTPMYGL RDVAA