Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32290 |
Symbol | |
ID | 8388553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3500329 |
End bp | 3501297 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977256 |
Product | hypothetical protein |
Protein accession | YP_003135028 |
Protein GI | 257057196 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.226359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.180902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCGGA CCATCCGTCG CTACCCGTCC CGTCGTTCGT TCGGTGTCGT CCTGACCGCG GTGACCGCGT TGCTGCTCGC CTCCTGCGGT TCCGATCCGG CCCAGGCGCG TTCCGCCGCC GTCGTCGGCG ACCACGTCAT CCAGCTTGAC GAGGTCCAGG CCGAGGTCCG GTGGTTGTTG GACCACGCGC CGCAGGCACA ACAGGCCCGG GAGCAGCGCA GGATCGATCA GATCAGCAGT GAGATCGTGC GCAGCAGGGT CGTGCACGAA CTGCTCGCGG TCGCCGAGGA ACGCGAGAAC CTCCGCGTCG ATGAGACCAA GGTCGACGAG CTGATCGAGG CGAGCGGAGG AGTGGAGGAA GCGGCCAGGA ACATCGCCGT CGAACCGTCC CGGGTGCGGG ACGTGGCCCG TGATCAGCTG CTGCTGGAAC AGCTCGGAAA GCACTATCAG CACCGGTTGT CGGTGCACTT CGTCGGTGCG ATGATCACCG AGTCCGACGC CGAGGCCACC GATTCGGAGG TCGCTCGGGC ACTCGGACGG CGGATCGCGG CCGATCCCGC GAACGTCGAG ACCATCCTGC GCGACTCGGG ACACCAGGTG ATCGATCGGA CGATCACCCT CGCCGATGCC CTGAACCAGG ACCCGGAACT GGCGATCAGC GCCGTGTTCG GTGCCGAGGA AGGGGCTGTG GTGGTCATCC GGCCCAGCCA GCAGCAGGTG GGTTGGTTGG TCGCGCTCAT CAAGGACCGC ACGGTGCGGT CGGACGTCGA GGAGCCGGAG GAGGACCAGC CGGTCGACCC CCGGTTGCTC TACTGGGCGG GGCTGCGGCA GTTGCAGCCG ATCGCCGACG AACTCGGCGT GCAGATCAAC CCGCGCTACG GGGTGTGGGA CGACACGGGG CTGGCTCCGG CCCCCAGTGA AGAAGAGGTG ACCGGCTACC AGTGGGAGTC CCGTACCGTG CAGCCATGA
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Protein sequence | MIRTIRRYPS RRSFGVVLTA VTALLLASCG SDPAQARSAA VVGDHVIQLD EVQAEVRWLL DHAPQAQQAR EQRRIDQISS EIVRSRVVHE LLAVAEEREN LRVDETKVDE LIEASGGVEE AARNIAVEPS RVRDVARDQL LLEQLGKHYQ HRLSVHFVGA MITESDAEAT DSEVARALGR RIAADPANVE TILRDSGHQV IDRTITLADA LNQDPELAIS AVFGAEEGAV VVIRPSQQQV GWLVALIKDR TVRSDVEEPE EDQPVDPRLL YWAGLRQLQP IADELGVQIN PRYGVWDDTG LAPAPSEEEV TGYQWESRTV QP
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