Gene Svir_32290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32290 
Symbol 
ID8388553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3500329 
End bp3501297 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID644977256 
Producthypothetical protein 
Protein accessionYP_003135028 
Protein GI257057196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.226359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.180902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGGA CCATCCGTCG CTACCCGTCC CGTCGTTCGT TCGGTGTCGT CCTGACCGCG 
GTGACCGCGT TGCTGCTCGC CTCCTGCGGT TCCGATCCGG CCCAGGCGCG TTCCGCCGCC
GTCGTCGGCG ACCACGTCAT CCAGCTTGAC GAGGTCCAGG CCGAGGTCCG GTGGTTGTTG
GACCACGCGC CGCAGGCACA ACAGGCCCGG GAGCAGCGCA GGATCGATCA GATCAGCAGT
GAGATCGTGC GCAGCAGGGT CGTGCACGAA CTGCTCGCGG TCGCCGAGGA ACGCGAGAAC
CTCCGCGTCG ATGAGACCAA GGTCGACGAG CTGATCGAGG CGAGCGGAGG AGTGGAGGAA
GCGGCCAGGA ACATCGCCGT CGAACCGTCC CGGGTGCGGG ACGTGGCCCG TGATCAGCTG
CTGCTGGAAC AGCTCGGAAA GCACTATCAG CACCGGTTGT CGGTGCACTT CGTCGGTGCG
ATGATCACCG AGTCCGACGC CGAGGCCACC GATTCGGAGG TCGCTCGGGC ACTCGGACGG
CGGATCGCGG CCGATCCCGC GAACGTCGAG ACCATCCTGC GCGACTCGGG ACACCAGGTG
ATCGATCGGA CGATCACCCT CGCCGATGCC CTGAACCAGG ACCCGGAACT GGCGATCAGC
GCCGTGTTCG GTGCCGAGGA AGGGGCTGTG GTGGTCATCC GGCCCAGCCA GCAGCAGGTG
GGTTGGTTGG TCGCGCTCAT CAAGGACCGC ACGGTGCGGT CGGACGTCGA GGAGCCGGAG
GAGGACCAGC CGGTCGACCC CCGGTTGCTC TACTGGGCGG GGCTGCGGCA GTTGCAGCCG
ATCGCCGACG AACTCGGCGT GCAGATCAAC CCGCGCTACG GGGTGTGGGA CGACACGGGG
CTGGCTCCGG CCCCCAGTGA AGAAGAGGTG ACCGGCTACC AGTGGGAGTC CCGTACCGTG
CAGCCATGA
 
Protein sequence
MIRTIRRYPS RRSFGVVLTA VTALLLASCG SDPAQARSAA VVGDHVIQLD EVQAEVRWLL 
DHAPQAQQAR EQRRIDQISS EIVRSRVVHE LLAVAEEREN LRVDETKVDE LIEASGGVEE
AARNIAVEPS RVRDVARDQL LLEQLGKHYQ HRLSVHFVGA MITESDAEAT DSEVARALGR
RIAADPANVE TILRDSGHQV IDRTITLADA LNQDPELAIS AVFGAEEGAV VVIRPSQQQV
GWLVALIKDR TVRSDVEEPE EDQPVDPRLL YWAGLRQLQP IADELGVQIN PRYGVWDDTG
LAPAPSEEEV TGYQWESRTV QP