| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31890 |
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| Symbol | |
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| ID | 8388513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3457897 |
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| End bp | 3459270 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977216 |
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| Product | cystathionine beta-synthase |
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| Protein accession | YP_003134989 |
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| Protein GI | 257057157 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.499085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.354911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG CCGAACACGT CATCGACCTC GTGGGCAACA CCCCTCTGGT CAAGCTGAAC
GCCCTCGCCG AAGGGGTCGA GCCGCTCATC CTCGCCAAGG TCGAGTACAT GAACCCCGGC
GGCAGCGTGA AGGACCGGAT CGCCCTGCGC ATGGTCGAGG CGGCCGAGGC TTCGGGGGAG
TTGCGGCCGG GCGGAACGAT CGTGGAACCG ACGTCGGGCA ACACCGGCGT GGGCCTGGCC
ATGGTGGCGC AGCGCAAGGG GTATCGATGC GTGTTCGTGT GTCCTGACAA GGTCAGCGAG
GACAAGCGCA ACGTGCTCAA GGCGTACGGC GCCGAGGTCG TGGTGTGCCC CACGGCCGTG
CCGCCGGAGC ACCCCGAGTC GTACTACAGC GTCTCCGACA GGCTCGCCCG GGAGATCGAG
GGCGCGTGGA AGCCGAACCA GTACGCCAAC CCGAACAACC CGGAGAGCCA CTACCACTCC
ACGGGCCCCG AGATCTGGCG GCAGACCGAG GGGAAGTTGA CCCACTTCGT CGCGGGTGTG
GGCACCGGGG GCACCATCTC CGGCACCGGT CGGTATCTCA AGGAGGCGTC CGAGGGACGG
GTCAAGGTCA TCGGCGCCGA CCCGGAGGGG TCGGTGTACT CGGGTGGCAC CGGCAGGCCG
TACCTCGTGG AGGGGGTCGG GGAGGACTTC TGGCCGGACA CCTACGACCG CACCATCGCC
GACGAGATCA TCCCGGTGAC CGACGCCGAG TCGTTCGAGA TCACCCGCAG GCTCGCCCGT
GAGGAGGGGC TGCTGGTGGG TGGTTCGTGC GGTATGGCCG TGGCCGCCGC GTTGAAGCTG
GCGAAGCGGT GCGGGCCGGA CGACGTGATC GTGGTGCTGC TGCCCGACGG TGGCCGCGGG
TACCTCGGCA AGATCTTCAA CGACAAGTGG ATGTCGTCGT ACGGGTTCCT GTCGCCCGAT
TCACAGGACG CGACGGTCGG TGACGTGTTG CGCCGCAAGG ACGGCAGCAT GCCCGACCTG
GTCCACACCC ACCCCACCGA GACCGTGGCG GAGGCCGTGT CGATCCTGCG CGAGTTCGGG
GTGAGCCAGA TGCCGGTCGT CAACGCCGAG CCGCCCGTGA TGGCGGGTGA GGTCGTGGGC
GCGGTCAACG AGCGGGACCT GTTGGAGGCG TTGTTCACCG GCAAGGCGTC GCTGACCGAC
CAGCTCGACA AACACATGTC GCCCCCGCTG CCCACGATCG GCGCCGGTGA GCACATCGGT
GCCGCGATGA AGGCGCTCAG CGAGGCCAGT GGTGCGTTGG TGCTGCTGGA CGGCAAGCCG
GCGGGGGTCG TGACCCGGCA CGACCTGCTG GCGTTCCTCT CCGGTCACGC TTGA
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| Protein sequence | MDYAEHVIDL VGNTPLVKLN ALAEGVEPLI LAKVEYMNPG GSVKDRIALR MVEAAEASGE
LRPGGTIVEP TSGNTGVGLA MVAQRKGYRC VFVCPDKVSE DKRNVLKAYG AEVVVCPTAV
PPEHPESYYS VSDRLAREIE GAWKPNQYAN PNNPESHYHS TGPEIWRQTE GKLTHFVAGV
GTGGTISGTG RYLKEASEGR VKVIGADPEG SVYSGGTGRP YLVEGVGEDF WPDTYDRTIA
DEIIPVTDAE SFEITRRLAR EEGLLVGGSC GMAVAAALKL AKRCGPDDVI VVLLPDGGRG
YLGKIFNDKW MSSYGFLSPD SQDATVGDVL RRKDGSMPDL VHTHPTETVA EAVSILREFG
VSQMPVVNAE PPVMAGEVVG AVNERDLLEA LFTGKASLTD QLDKHMSPPL PTIGAGEHIG
AAMKALSEAS GALVLLDGKP AGVVTRHDLL AFLSGHA
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