Gene Svir_31390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31390 
Symbol 
ID8388463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3403055 
End bp3403477 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID644977166 
Productuncharacterized protein involved in tolerance to divalent cations 
Protein accessionYP_003134939 
Protein GI257057107 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.473848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTACG TCGGTTCCCC CGATATCGCG CGGTTCCGGC GTCCTTGTAG AGCCCCGGTC 
GTCTCGGCCT GGCTCCGTGA TCGAACCGGT CGGTACGCTC GACGCATGGC CGAACATGTC
ATCGTGGCGA CCACTACGGA CAGTGAAGAC AAGGCGCGTG AGCTGGCGTC GAGCGTGATC
GATGCGAAGC TCGGGGCCTG CGCGCAGATC GTTCCCATCA CCAGCGTGTA CCGCTGGGAG
GGCAAGGTCG AGACGGACCC GGAATGGCGC GTTGAGATCA AGACGGCTGC TGATCGAGTG
GCCGACTTGA CCGACCATCT GAAGAAGATC CACACCTACG ACGTGCCCGA GATCGTTGCC
ACCCCGATCG AGGGTGGCTC AGCCGAGTAC CTGTCGTGGG TGGTGGACGA AACCCGTAGT
TAG
 
Protein sequence
MLYVGSPDIA RFRRPCRAPV VSAWLRDRTG RYARRMAEHV IVATTTDSED KARELASSVI 
DAKLGACAQI VPITSVYRWE GKVETDPEWR VEIKTAADRV ADLTDHLKKI HTYDVPEIVA
TPIEGGSAEY LSWVVDETRS