Gene Svir_31320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31320 
Symbol 
ID8388456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3398182 
End bp3398664 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID644977161 
Productacetyltransferase 
Protein accessionYP_003134934 
Protein GI257057102 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.128466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.247928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GTCCGCTCAC ACCCCAGGAC CTCCCGGTCC TTCTCGAGTT GACGATCGAC 
ACTTTCGAAC CGTTCTACGA GCACTCGTTC CGCCCGCTCG TCGGTGACGT CGTCTTCGCC
AACCGGCACG GTGACTGGCG AGAGGACTAC CGTCGCCACC TCGCCGGTCT GCATGCCCCG
GAAGACGGTC GGTATGCCGC CGTCGCCGAA GTCAACGAAC GGATCGTGGG ATTCGTCGGC
TGGATCCTCC GGCCCGCTGA GCGTCACGGC GAGATCGACC TCCTGGCAAT CGCGGCCGAC
AGCCGTCGGC GCGGCGTCGG CAGGGCGCTC GTCGAACACG CGATCGCGCA CTTGAAGACC
GGTGGCGCAA AAGTCGTGTC CATCGGCACC GGCGGGGACG ACTTCCACGC CCCTGCCCGC
GCTCTCTACG AGGAACTCGG GTTCACCCCG TTCCCCAACG TCAACTACAC GAAGGCGATC
TGA
 
Protein sequence
MDIRPLTPQD LPVLLELTID TFEPFYEHSF RPLVGDVVFA NRHGDWREDY RRHLAGLHAP 
EDGRYAAVAE VNERIVGFVG WILRPAERHG EIDLLAIAAD SRRRGVGRAL VEHAIAHLKT
GGAKVVSIGT GGDDFHAPAR ALYEELGFTP FPNVNYTKAI