Gene Svir_30840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30840 
Symbol 
ID8388408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3344874 
End bp3345635 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID644977113 
Producthypothetical protein 
Protein accessionYP_003134886 
Protein GI257057054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAAA AACAAGTCAC CCTCTCAGTC GGGGCCCTCG CCAACGCCGT CGAACGCGAG 
GGCCTCGGTC AACTGCACCT GGCACTGCAG CCCGAGCCCA TGTGGATCCC GCAGGAAGAA
CAGGACTCGG CACGATCCGC GTTGGACAAC GAGCTGATCG AAGCGGGACT GCTCAACCGA
CGTGGACGTC TCGACCCCGA CTTCCTCGAC TGGCTGCCCG TCCTCACCAA CGCCGCGATC
GAGTACTACG GCTGGCTGTC CCAGGAAGGC GGCACCACCT GGAGCGCACT CGCCGCGGCC
CGAGGCCTGC AAGGCGTACT CGCCGTGCGC GAAGGCGACC GAGTGACCCT CTCCGCGGCC
GACCACACCG ACCTGCCCGC CACGCTCGTG CGCCAACTCC CTGACGTCGG GCCCGGTGGT
GGCAGCCGCT GGGTGGTGCG GGTCTCCGAC TTCCGCGAGG CCCTGCAACA CACCCACCCC
GACCGGGCCG TGGCAGCCGT CGTCGCCGAA ATCTCCAAGG TCATGGAACG ACCCGCCTTC
GGCGGAGGCG AACTGTACGT GGCGGAACGC GACCCCGACG GACACCGCCG CACCCTGCGC
AACCCCTTGC ACTACGTCGA CACCGACTGG GGGCGCTACC TCAACCACCG TGTTCGAACA
GGCGACGAGG AGGAATTCCG CGTCCAGCCC GCCGATGCCG CGACCCTGGC GGCCACGTTG
GAATCGTTAC GCAGCCACCT CACCGTGGCG CAGCACGTCT GA
 
Protein sequence
MNEKQVTLSV GALANAVERE GLGQLHLALQ PEPMWIPQEE QDSARSALDN ELIEAGLLNR 
RGRLDPDFLD WLPVLTNAAI EYYGWLSQEG GTTWSALAAA RGLQGVLAVR EGDRVTLSAA
DHTDLPATLV RQLPDVGPGG GSRWVVRVSD FREALQHTHP DRAVAAVVAE ISKVMERPAF
GGGELYVAER DPDGHRRTLR NPLHYVDTDW GRYLNHRVRT GDEEEFRVQP ADAATLAATL
ESLRSHLTVA QHV