| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30640 |
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| Symbol | |
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| ID | 8388388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3325961 |
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| End bp | 3326569 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977093 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_003134866 |
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| Protein GI | 257057034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.13721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAC GCGAACTGGC CGTGAGGGAT GCCTACGAAT TCGTTCCGCC CGCTTTTCCC
GACCGGCGGG GCCTTTTCGT GGCCCCGTAC CAGGAACCCG CGTTCGTCGA GGCCGTTGGT
CATCGCCTCA CCGTGGCGCA GACGAACAAC AGCGTCTCGC GCCGGGGGAC GATCCGGGGC
GTCCACTTCC GCGACACCCC TCCCGGTCAG GCCAAGTACG TGTACTGCGC CCACGGCGCG
CTCCTCGACG TCGTGGTGGA TCTCCGGGTC GGTTCGCCCA CGTTCGGACA ATGGGACGTC
GTACGACTCG ACAGCACGGC CATGCGCTGC GTCTACCTCG CCGAGGGACT CGGTCATGCG
TTCATGGCGC TCGAGGACGG CACCGTCATG ACGTACCTGT GCTCCACGGG ATACGAACCG
TCCGCGGAAC ACGGCATCAC CCCGCTCGAC CCCGAACTGA ACCTGCCTTG GCCGTCCGAC
GTCGAACCGG TGCTGTCGGA CAAGGACGCC GCGGCCCCCA CGCTCGCGCA GGCGCTCGAA
GCGGGGATCC TGCCCCGCTA CGAGGACTGC CTCGCCCACT ACGAACGACT GCGTAAGTCC
GAGGGCTGA
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| Protein sequence | MDVRELAVRD AYEFVPPAFP DRRGLFVAPY QEPAFVEAVG HRLTVAQTNN SVSRRGTIRG
VHFRDTPPGQ AKYVYCAHGA LLDVVVDLRV GSPTFGQWDV VRLDSTAMRC VYLAEGLGHA
FMALEDGTVM TYLCSTGYEP SAEHGITPLD PELNLPWPSD VEPVLSDKDA AAPTLAQALE
AGILPRYEDC LAHYERLRKS EG
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