| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30460 |
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| Symbol | |
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| ID | 8388370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3296002 |
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| End bp | 3297666 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644977075 |
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| Product | Na+/proline symporter |
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| Protein accession | YP_003134848 |
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| Protein GI | 257057016 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0720305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.147602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCAGC TGAGCGCAAC GACTACCGTT CTCTTATTGG TCGGGTTCTA TGGTGTCACG
TTTCTCTTAA CTCGAACAAT TAGAGAGAAA AAAGAGAACG TTGACGGCTT CATGGTCTCG
AACAGTGCGA TCGGTTTCGG GATCTCGGCT ACGAGCATGA CCGCCACCTG GGTGTGGGCG
GCCTCGTTCT ACGCGAGCGC CAGTTCCGGC TACACCTACG GTCTGTCGGG CCCCATCCAC
TACGGGCTCT GGGGCGCGCT CATGATCCTC TGCATCTACC CGTTCGGGCG GCGGTTCCGT
GAGTTGGCGC CGCGGGCGCA CACTCTGGCC GAGTTGATGC GAGCCCGGCA CGGAAAATCG
AGCCAGCTGA TTCTCGCGTT CTCCAACATC GCCGGCAGCC TCATCAGCTT GACGGCGAAC
TTCACCGCAG CCGGCGCGCT GGTGGAGATC CTCACGCCGT TCAACTTCAT GCACGGCGTG
CTGGCGGTGG CGGTCGGCGT GCTCGTCTAC ACGCTGTGGT CGGGCTTCCG TGCTTCGGTG
CTGACCGACT ACGCCCAGCT CGTGGCCATG ATGTTGGCCG CGGCGATCAT CATCCCGATG
GTGTTCTTCG CCGCCGGTGG CCCGAGTTTG ATCGACGAGG GCATGCTGAA GATCACCGAC
GAGCAGGCGG ACTTCTTCTC CGGTACCGCG TTCCTGGAGC AGGGCGCCCC CTACCTGGCG
GCGGTGCTGG CTTACGCGGT CGGTAACCAG ACGATCGCCC AGCGCCTCTT CGCGGTGCGG
CAGGACAAGA TCAAGGCCAC GTTCATCACA GCCACGCTGG GTTACGGCGG CACGGTGATC
GGCCTCGGCA TGATCGGCCT GGTCGCCCTG ATGGTCGGTC TGCAGCCGAT GGACGGCGAC
ATGAACAACA TCATCCCGCA GATGGCGTCG GACTACCTGC CCGCCTTCAT GATCGGCGTG
CTGTTCATCA TGGTGATCGG CTCGCTGTCC TCCACCGCGG ACGCCGACCT CGCGGCCCTG
TCGTCGCTGG TGATGACCGA CATCTACGGC CGGAACCTGG CCCGGAACAA GGCCAAGCCC
GAGACGATGC TGCTGATCGG GCGGATGACG ATGGTCGGTG CCACGGCCAT CGGCGTCATG
ATCGCCATGA CGAAGTTCGA CATCCTCGAC CTGCTGGTGT TCATGGGTGG CCTGTGGGGT
GCGCTGGTGT TCCCGGTCAT CGTCAGCTGC TTCTGGGACC GGATCAACAA CCTGGCGTTC
ACCATGTCCG CCATCGTCGG CGTGGGCTTC TTCGTCGTGG CGCGCTTCGA GCTGCTGGAG
CTGACCGGCG TCGTCGGGTT CGTGATGGAG ATCGCGGCGG CGATCGGTGC GGCGGTGGTG
TTCGGGCTCA TGGCGTTCGG CTTCCTCGGC AAACGCGTCG GCCTCGGGGT CGCCGGTATC
GCCTTCGTCG TCCTCACGCC GTTTGTGATC GGCTTCCTCC GGGACTACCC GACGCTGCTC
GGCGCGCTGG TCGCCTACGG CGCCAGCACG GTGACGTGTG TGCTGATCAC CATGCGCAAC
ACCGAGCGGT TCGACTTCGC GCTGATCGCT GAGCGGGTCA CCGCGTTCCA AGAGGAAGCG
AGGCAGAGGC CGGAGCACGG CGACGACGCC GTCCCCGCCC GCTGA
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| Protein sequence | MFQLSATTTV LLLVGFYGVT FLLTRTIREK KENVDGFMVS NSAIGFGISA TSMTATWVWA
ASFYASASSG YTYGLSGPIH YGLWGALMIL CIYPFGRRFR ELAPRAHTLA ELMRARHGKS
SQLILAFSNI AGSLISLTAN FTAAGALVEI LTPFNFMHGV LAVAVGVLVY TLWSGFRASV
LTDYAQLVAM MLAAAIIIPM VFFAAGGPSL IDEGMLKITD EQADFFSGTA FLEQGAPYLA
AVLAYAVGNQ TIAQRLFAVR QDKIKATFIT ATLGYGGTVI GLGMIGLVAL MVGLQPMDGD
MNNIIPQMAS DYLPAFMIGV LFIMVIGSLS STADADLAAL SSLVMTDIYG RNLARNKAKP
ETMLLIGRMT MVGATAIGVM IAMTKFDILD LLVFMGGLWG ALVFPVIVSC FWDRINNLAF
TMSAIVGVGF FVVARFELLE LTGVVGFVME IAAAIGAAVV FGLMAFGFLG KRVGLGVAGI
AFVVLTPFVI GFLRDYPTLL GALVAYGAST VTCVLITMRN TERFDFALIA ERVTAFQEEA
RQRPEHGDDA VPAR
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