| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30380 |
|---|
| Symbol | |
|---|
| ID | 8388362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3291507 |
|---|
| End bp | 3292010 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977067 |
|---|
| Product | multisubunit Na+/H+ antiporter, MnhE subunit |
|---|
| Protein accession | YP_003134840 |
|---|
| Protein GI | 257057008 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.302354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGT TCGCGCGGAT CGCCGTACTC ACGGTGCTCT ACCTGCTGGC GTTGGGAAAA
GCCTATCCGG GCGACCTCCT CGTCGGGGCC GTCCTCGCGG TGGTGCTGGT CATCGCCAGC
CAGCGGTTCG TCCTCTCCCT GAAAGCGGCC GAAGGTCTCC CGCCGCCCGT CTCAGCGGTG
CGGCGGATCG CCGGTGTCCC GGCGCTGCTC GGTGGCACGC TGATCGACAT CGCGCGCGGC
AGTTGGAAGG TGGCACGGTA CTGTCTGCGT CCCCCTCCCG ACTTCGAACC CGGCCTGGTC
ACCATCCCGA TCGGGCAAAG TTCCCCGGGT TCGGCGACGG CCTGGGGGAT CCGGGTCGGG
ATCGCCCCGG ACAGCGTCGT CGTGGGGATC GACGAGAAGC AGGGCCACCT GCTGGCACAC
GTACTCGACT CCCGTGACCC GGACGCGGTG CGGGCCGAGG AGTTGCACAT CTACGAGCGG
CGGCAACGCC GGGTCTTCCC GTGA
|
|---|
| Protein sequence | MALFARIAVL TVLYLLALGK AYPGDLLVGA VLAVVLVIAS QRFVLSLKAA EGLPPPVSAV
RRIAGVPALL GGTLIDIARG SWKVARYCLR PPPDFEPGLV TIPIGQSSPG SATAWGIRVG
IAPDSVVVGI DEKQGHLLAH VLDSRDPDAV RAEELHIYER RQRRVFP
|
|---|
| |