Gene Svir_30380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30380 
Symbol 
ID8388362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3291507 
End bp3292010 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content69% 
IMG OID644977067 
Productmultisubunit Na+/H+ antiporter, MnhE subunit 
Protein accessionYP_003134840 
Protein GI257057008 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.302354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGT TCGCGCGGAT CGCCGTACTC ACGGTGCTCT ACCTGCTGGC GTTGGGAAAA 
GCCTATCCGG GCGACCTCCT CGTCGGGGCC GTCCTCGCGG TGGTGCTGGT CATCGCCAGC
CAGCGGTTCG TCCTCTCCCT GAAAGCGGCC GAAGGTCTCC CGCCGCCCGT CTCAGCGGTG
CGGCGGATCG CCGGTGTCCC GGCGCTGCTC GGTGGCACGC TGATCGACAT CGCGCGCGGC
AGTTGGAAGG TGGCACGGTA CTGTCTGCGT CCCCCTCCCG ACTTCGAACC CGGCCTGGTC
ACCATCCCGA TCGGGCAAAG TTCCCCGGGT TCGGCGACGG CCTGGGGGAT CCGGGTCGGG
ATCGCCCCGG ACAGCGTCGT CGTGGGGATC GACGAGAAGC AGGGCCACCT GCTGGCACAC
GTACTCGACT CCCGTGACCC GGACGCGGTG CGGGCCGAGG AGTTGCACAT CTACGAGCGG
CGGCAACGCC GGGTCTTCCC GTGA
 
Protein sequence
MALFARIAVL TVLYLLALGK AYPGDLLVGA VLAVVLVIAS QRFVLSLKAA EGLPPPVSAV 
RRIAGVPALL GGTLIDIARG SWKVARYCLR PPPDFEPGLV TIPIGQSSPG SATAWGIRVG
IAPDSVVVGI DEKQGHLLAH VLDSRDPDAV RAEELHIYER RQRRVFP