| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29470 |
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| Symbol | |
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| ID | 8388271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3187379 |
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| End bp | 3188050 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644976978 |
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| Product | amino acid ABC transporter membrane protein |
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| Protein accession | YP_003134752 |
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| Protein GI | 257056920 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCGG TATGGGATTG GCAATTCGCC TTCGAGGTCC TGCCCGCCAT CCTCCACGGG
CTACTGGTCA CCATCCAGGC CACGGTGCTC GGTTCCGCGC TCGCGTACGT CCTGGGCTTG
GTGTTCGCGC TGCTGCGCCG ATCACCGATC CGGCTGGTCA GCGGGGGTGT CTGGCTGTTC
ATGGAGTTCG TGCGCAGCAC GCCCCTGCTG GTGCAGCTGT TCTTCCTCTT CTACGTCCTG
CCGCTGGTCG GGATCACGCT GTCGCCGATG GTGACCGGGG TGATCGGTCT CGGACTGCAT
TACGCCACGT ACACGGCCGA GGTGTACCGC GCGGGTATCG AGGCCGTGCC CAAGGGACAG
TGGGAGGCCG CGACCGCGTT GAGCCTGCCA CGGACACGCA CCTGGACCGC GGTGATCCTG
CCGCAGGCGA TCACGCGAGT GTTGCCCGCA TTGGGCAACT ACACGATCTC GATGTTCAAG
GAGACCCCGC TGTTGTTGGC GATCGGAGTG CTCGACATCG TCGGCGCGGC CCAGGAAGAA
GCATCGTTGG CATTCCGATA CGTCGAACCG ATCACTATCG CCGGTATTCT CTTCCTTCTC
CTGAGCTACC CGTCCTCGCT ACTCGTCCGA TATTTGGAGC GTCGTTTTGG ACTCGCAAAG
CAATCCGTAT AG
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| Protein sequence | MNSVWDWQFA FEVLPAILHG LLVTIQATVL GSALAYVLGL VFALLRRSPI RLVSGGVWLF
MEFVRSTPLL VQLFFLFYVL PLVGITLSPM VTGVIGLGLH YATYTAEVYR AGIEAVPKGQ
WEAATALSLP RTRTWTAVIL PQAITRVLPA LGNYTISMFK ETPLLLAIGV LDIVGAAQEE
ASLAFRYVEP ITIAGILFLL LSYPSSLLVR YLERRFGLAK QSV
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