Gene Svir_29350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29350 
Symbol 
ID8388259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3178100 
End bp3178303 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content71% 
IMG OID644976966 
Productputative regulatory protein, FmdB family 
Protein accessionYP_003134740 
Protein GI257056908 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCT ACGCCTATCG CTGCCGTGTG TGCGAGGAGT CGTTCGAGCT GCAGCGCCCC 
ATGAGTGAGT CGAGTGCACC CGCGTCGTGT CCCGAGGGGC ACGACGACAC GGTGAAGCTG
CTGACCACGG TCGCCCTGAC CGGTTCGGCA CAGGCGCCCG CGCCGGCGGG TGGCTGCTGC
GGTGGCGCCT GCGGGTGCGG GTGA
 
Protein sequence
MPTYAYRCRV CEESFELQRP MSESSAPASC PEGHDDTVKL LTTVALTGSA QAPAPAGGCC 
GGACGCG