Gene Svir_29330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29330 
Symbol 
ID8388257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3176023 
End bp3176547 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID644976964 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003134738 
Protein GI257056906 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGC GGCCGACCTT CCTACGCACA CAGCGGCTGG TGCTACGGCC GTTCACCGAC 
GACGACCTAC CCGTGGTCGT CGGTCTGCAA TGCGCGCACC AGACCCACCC TTACGAGCTC
TCCCCTCGCA CCCCGAGCGA AGCGCAGGCA CAGTTCGTCT CCTGGCGACG GCACTGGGCC
GAGCACGGTT TCGGCTATCT GGTGGTGGAA CACGCCGAGA CCCACACCGT GCTCGGTGTG
GGCGGGGTAC AGCTCAGCTC GCTCGACGGC GAACAAGTGC TCAACCTGTA CTACCGCTTC
TTCCCCGACG CCTGGGGTCA CGGTTACGCC TCGGAGATGG GCGCGGCGGT GATCGACTGG
TCCGAGCACG CGGTCCCCGA GAAGCCCGTG GTCGTAGTCA CCGCCGTGAA CAACGCCCCG
GCGAGGAGGG TGGCGGAGAA GCTGGCGTTC TCCGAGTACC GAAGGGACCA CTTCCTGGGC
GTGCCCACCG TGTACTACCG CAGAGACCCC TCGACCGCCG ACTGA
 
Protein sequence
MTRRPTFLRT QRLVLRPFTD DDLPVVVGLQ CAHQTHPYEL SPRTPSEAQA QFVSWRRHWA 
EHGFGYLVVE HAETHTVLGV GGVQLSSLDG EQVLNLYYRF FPDAWGHGYA SEMGAAVIDW
SEHAVPEKPV VVVTAVNNAP ARRVAEKLAF SEYRRDHFLG VPTVYYRRDP STAD