Gene Svir_29220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29220 
Symbol 
ID8388246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3164685 
End bp3165242 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID644976953 
Productprotein of unknown function (DUF2017) 
Protein accessionYP_003134727 
Protein GI257056895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.942758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.431311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGAAT GGCGCCGCAA AGGCGGCAAG GTGGTCGGCG GGTTCGAGCA ACAGGAGGCG 
GCCGTGCTGC GCGGCCTGGT GAGCCAGGTC GAGGACATGT TGAAGGCGCG CGCGGAGGAG
GCCCCGCAGG ACGAGCTCGC CGAGCTGACG GGCATCCGTA CGGGCCCCTC GAAGGGACCC
GACGATCCGG TGCTGGGACG GTTGTTGCCG GACTTCCACA AGATCGACCC GGACACGCCG
TCCAAGGAGA CCCTGGACTC GGCCGCCGCA CTGCGTTCGC TGTACGAGCC GGAGGTGCTG
GACGCGAAGA TCGGTGTGGC CGAGGTGGTG TTGCAGACAC TCCCGCCGGG CGGCGGTGAG
GTGCGGCTGA CGTACGAACA GGCCGATGCC TGGTTGTCGG CGTTGAACGA TGTGCGGCTG
GCCCTGGGCA CGGCGCTGGA CGTCACCGAG GACGTGCCCG ATGAGCTTCC GCCGGACGAT
CCCCGTGCCC CGCACCTGGG GGTGTACCAC TGGCTGACGT GGGTGCAGGA CACCCTCGTG
CAGGCTCTCA CCGGTTGA
 
Protein sequence
MREWRRKGGK VVGGFEQQEA AVLRGLVSQV EDMLKARAEE APQDELAELT GIRTGPSKGP 
DDPVLGRLLP DFHKIDPDTP SKETLDSAAA LRSLYEPEVL DAKIGVAEVV LQTLPPGGGE
VRLTYEQADA WLSALNDVRL ALGTALDVTE DVPDELPPDD PRAPHLGVYH WLTWVQDTLV
QALTG