Gene Svir_29090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29090 
Symbol 
ID8388233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3155776 
End bp3156255 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID644976940 
ProductPeroxiredoxin 
Protein accessionYP_003134714 
Protein GI257056882 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.636847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GCATCCGTCT CGCCGAAGGC GACCCGGCCC CCGACTTCAC CCTGCCGGAC 
AGCGAGGGCA ACCCCGTGTC GCTGTCCGAC TTCCGCGGCC AGTCCGTGGT GGTGTACTTC
TACCCGGCCG CGGGCACCCC CGGCTGCACG AAGCAGGCAT GCGACTTCCG CGACAACCTC
GCCCAGCTCA ACGACGCCGG ATACCAGGTG CTCGGGATCT CCCCGGACAA GCCGGAGAAA
CTGGCGAAGT TCGTCGAGAA CGAGAAGCTC ACCTTCCCGC TGCTGTCCGA CCCCGACAAG
AAGGTCCTCA CCGAGTGGGG CGCCTTCGGT GAGAAGAAGA ACTACGGACG CATCGTGCAG
GGCGTGATCC GTTCGACGTT CGTGGTGGAC CCCGAGGGCA CGATCGCGGT GGCGCAGTAC
AACGTCCGTG CCACCGGCCA CGTCGCCAAG CTGATGCGGG ACCTCAAGCT CACCGCGTAG
 
Protein sequence
MTDRIRLAEG DPAPDFTLPD SEGNPVSLSD FRGQSVVVYF YPAAGTPGCT KQACDFRDNL 
AQLNDAGYQV LGISPDKPEK LAKFVENEKL TFPLLSDPDK KVLTEWGAFG EKKNYGRIVQ
GVIRSTFVVD PEGTIAVAQY NVRATGHVAK LMRDLKLTA