| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28860 |
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| Symbol | |
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| ID | 8388210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3132269 |
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| End bp | 3134107 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976917 |
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| Product | AMP-forming long-chain acyl-CoA synthetase |
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| Protein accession | YP_003134692 |
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| Protein GI | 257056860 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.549892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCACTC AGCCATCCGT CGCAGCCCAG ATCGAGGGCC AGACCATCGC CAAGCTGCTC
CGCCGCAATG CCACCGAGTT CGCCGACCTA CCGGCCCTGA CCTCCCTGGA CGATCCCGAC
AGCCCCACGC TGAGCTGGGC GGAAGTACGC GAACAGGCCG CCGCCGTCGC GCACGGACTC
GCCGACCTCG GCCTCCGCTC GGGCCAACGC ATGATCATCA TGTCGCCCAG TCGCCCCGAG
CACATCATCG CCGATCTGGC CGCCACCAAC CTCGCGGCCA TCCCCTGCAC CGCGTACTCG
ACGTTGAGCA GCGAACAAAT CCGTTACGTG GTCAACCACA GCGCCGCTCC GATCGCGGTC
GTCGCGGGTG AGGAGGAACT GACTCGATGG CGCCCGGTGC TCGACGAGTT ACCGGCCTTG
CGCCACATCA TCATCCTCGA TGACGACACC GACGACATCA CTGCCGAGGA TGAACGGTTC
GTCTCCTATG CGAAGCTGCG GGAACGCGGA ACCGCCCTCC ACGCGCAATC CCCGTCGACG
TTCGAACAGT GGACCGACGA GATCGGACCC GACGACCCGC TGTCGATGAT CTACACGTCG
GGCACCACGG GCACTCCCAA GGGAGTGGTG CTTTCCCACC GCAACGCCAT TCACGAAGCC
GTCGCCGTGT ATGCGCTCCA CAACGCGCCC CCACACATCT CGAACATCGC CTACCTGCCG
CTCGCACACA TCGCCGAACG CGAACTGTCG ATCTACATGC CCGTGGTGCA CGCCGGCCAC
GTCCACACGC TCGCCGACCC GGGCGACATC GCCAGCGCAC TCAGCCGGGT TCGGCCCGAC
TCGCTCTTCG GCGTGCCCAG GGTGTGGGAG AAGATGGTGG CAGGGATGAA GAGCATGCTC
ACCGGCGTGC CCGGCGACCG GCGTGAAGCC CTGTTGGCCG CCAACGAACT GCTACAAACG
GGCTACAAAC TGCGTAGCGA GGGCAAAGAG GTACCGCAGG AGCTGGCGGA CCGCATCGCG
GAAACCGACC GCACCGTGCT CGCCCCCATC CGGCAGATGC TGGGCCTGGA CGGACTGATC
TTCGCCTCCA GCGGCGCGGC CGCGCTCCCT CTCGAGGTGC TGTACTTCAT CGCGGGTCTC
GGGGTCGAGA TCCATGAGGT GTGGGGCCTG TCGGAGACCG CGGGTGCCGT CACGAGCAAC
TGCGCCGACG CCTTCAAAGC CGGGACGGTG GGTCGCCCGA TCGCCGATGT CGAGGTCAAA
GTCGCCGACG ACGGTGAGTT GTTGGTCCGG GGCCCCATCG TGTTCCTCGG CTACCTGCAG
GAGGACGGAA CGATCGAATC GGCCACCGAC GCCGACGGCT GGTTCGCCAC GGGCGACATC
GGTTCGATGG ACGACGACGG GTTCGTCACC ATCACCGACC GGAAGAAGGA ACTCATCATC
ACCTCCGGGG GCAAGAACAT CGCCCCGACC AAGATCGAGA GCCTGCTCAA GGAACATCCG
CTCATCGGCC AGGCCATCGC GATCGGCGAC AATCGGCCCT ACCTCACGGC GCTCATCGTG
CTCGACGACG AGATGGCCCC CTCCTGGGCG GCGGCCCGCG GCATCGAGTC GGACGACCTC
GCCACGTTGG CCGAACATCC CGCCGTGCGC GCCGAGATCG ACCGGGCGGT CGACGCGGCC
AACGAACGGT TGGCCAGGGT GGAGCAGGTG AAACGCTATC GCCTGTTGAC CGAAACGTGG
ACCCCCGACA GCGGCGAACT CACCCCGACA CTGAAATTGA AACGCCGTGT CATCGTCGAT
CGGTACCACT CGGACATCGA AGCGCTCTAC CGGAATTGA
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| Protein sequence | MTTQPSVAAQ IEGQTIAKLL RRNATEFADL PALTSLDDPD SPTLSWAEVR EQAAAVAHGL
ADLGLRSGQR MIIMSPSRPE HIIADLAATN LAAIPCTAYS TLSSEQIRYV VNHSAAPIAV
VAGEEELTRW RPVLDELPAL RHIIILDDDT DDITAEDERF VSYAKLRERG TALHAQSPST
FEQWTDEIGP DDPLSMIYTS GTTGTPKGVV LSHRNAIHEA VAVYALHNAP PHISNIAYLP
LAHIAERELS IYMPVVHAGH VHTLADPGDI ASALSRVRPD SLFGVPRVWE KMVAGMKSML
TGVPGDRREA LLAANELLQT GYKLRSEGKE VPQELADRIA ETDRTVLAPI RQMLGLDGLI
FASSGAAALP LEVLYFIAGL GVEIHEVWGL SETAGAVTSN CADAFKAGTV GRPIADVEVK
VADDGELLVR GPIVFLGYLQ EDGTIESATD ADGWFATGDI GSMDDDGFVT ITDRKKELII
TSGGKNIAPT KIESLLKEHP LIGQAIAIGD NRPYLTALIV LDDEMAPSWA AARGIESDDL
ATLAEHPAVR AEIDRAVDAA NERLARVEQV KRYRLLTETW TPDSGELTPT LKLKRRVIVD
RYHSDIEALY RN
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