Gene Svir_28400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28400 
Symbol 
ID8388164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3083062 
End bp3084024 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID644976871 
ProductInosine-uridine nucleoside N-ribohydrolase 
Protein accessionYP_003134648 
Protein GI257056816 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCACCA AGCTGATCAT CGACACCGAC CCGGGAGTGG ACGACGCCTT CGCCATCGCG 
TTGGCAGCGC AGTCCGACGA CGTCGAGCTG CTGGGCGTGA CGACGGTGTT CGGCAACGTG
CCGATCGAGA CGACCACCCG TAACGCGCGC CGGATACTGG CGCTGTGCAA GCGTGGCGAC
GTCCCGGTGG CGGAGGGTGC CGCCCGCCCG CTCGTGCATC CCCACCTGCG CAGGGCGAAG
TACGTACACG GCCTCGACGG CTTGTCGGGG CGTTCGGCGG CGCTGCCCGA AGCGGAACGT
CCCGTCGAAC CCGGGGGCGC GGTGCGGCTC CTGTCCCGAC TGCTGGAAAG CTCCACGGAA
CCGGTGACGA TCGTGCCGAT CGGACCGCTC ACGAACATCG CCACGCTCCT GGCGGCCCGC
CCGGATCTAC ACCACAGGAT CGCCAGGTTG GTGATCATGG GCGGTGCGCT GACGCACGGC
AATTCCAGCG CCGCGGCCGA GTTCAACGTC TGGAGTGACC CGGAGGCCGC GCACCGGGTG
CTCACAGGCG GGGAGGTGCC GTGCGTGCTG GTGCCCATGG ACCTCACCTA TCGCTGCGCA
GTGGACAGGG AGTGGCTCGA CACACTCGCG GCCTCGGGAT CGCTCGGGGC CGCGCTGGCC
GCGCTGACCC CCGACTATCT CGCCCACTAC CGCAAAGCGC TCGGCTGGGA AGGCATGGTG
CTGCACGACG CGGTGGCGGT CGCGGAGGCC ATCCGCCCCG GAATACTGCG CACCGAATCG
CTGCCCGTCT CGGTGGAGAC GTCGTTCGGA CCCGCCCGTG GCGCGACGGT GGTCGACCGG
CGTCGTCCCG AAGTACGGGC CGAGACCGAG GTACCCGACG GGGTCACATC GGTGGACGTC
GCCGTGGACG CCGACCTGGA CGCTCTTCGC GCGTTTCTCC TGGAGCGGCT CACACTGCGC
TGA
 
Protein sequence
MGTKLIIDTD PGVDDAFAIA LAAQSDDVEL LGVTTVFGNV PIETTTRNAR RILALCKRGD 
VPVAEGAARP LVHPHLRRAK YVHGLDGLSG RSAALPEAER PVEPGGAVRL LSRLLESSTE
PVTIVPIGPL TNIATLLAAR PDLHHRIARL VIMGGALTHG NSSAAAEFNV WSDPEAAHRV
LTGGEVPCVL VPMDLTYRCA VDREWLDTLA ASGSLGAALA ALTPDYLAHY RKALGWEGMV
LHDAVAVAEA IRPGILRTES LPVSVETSFG PARGATVVDR RRPEVRAETE VPDGVTSVDV
AVDADLDALR AFLLERLTLR