| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28350 |
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| Symbol | |
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| ID | 8388159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3075886 |
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| End bp | 3077490 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976866 |
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| Product | malate synthase A |
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| Protein accession | YP_003134643 |
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| Protein GI | 257056811 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0888845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA CGGTGAACGG CCGGCTGCAG GTCGCCGGTC CCATGCGCGA GCGTTACGAC
GAGATCCTCA CTCCGGCCGC GCTGGAGTTC GTCGCGAAAC TGGACAACAC CTTCGCGGGC
CGTCGCCGGG AACTGCTCGA CGAGCGACGT CGGCGCAGGG AACGGCTGGC CTCCGGAGAG
GAGACGTTGG GTTTCCTGCC GCAGACCCAA CGGATCCGCA ACGACGAGAC GTGGCAGGTG
GCTCCACCCG CGCCCGGTCT TGAGGACCGC AGGGTGGAGA TCACCGGTCC GCCCGACCGC
AAGATGACGG TCAACGCGTT GAACTCCGGG GCGAAGGTGT GGCTCGCCGA TTTCGAGGAC
GCGACGTCAC CGACGTGGCA CAACATCGTG TCGGGGCAGC TCAACCTGTA CGACGCGATC
CGGCGCAACA TCGACTTCAC CGACCGGGGC AAGCGGTACG TGATCGGCGA CGAGCCGGCC
ACGATCGTCG CCAGGCCGAG GGGCTGGCAC CTGGTGGAGA AGCACATCCG GATCGACGGC
CGTCCCGTGT CGGCCAGTCT CGTCGACTTC GGCCTGTATT TCTTCCACAA CGCACGACAG
CTGTTGGCTC GCGGTAGCGG CCCGTACTTC TATCTGCCGA AACTGGAGAG CCATCTCGAA
GCGCGGTTGT GGAACGACGT GTTCCTGCTG GCGCAGGAAG AGCTCGGCAT CCCGAGGGGC
AGTATCCGCG CGACCGTGCT GATCGAGACG ATCACCGCGG CGTTCGAGAT GGACGAGATC
CTGTACGAGC TGCGCGAACA CGCCGCCGGG TTGAACGCGG GCCGATGGGA CTACATCTTC
AGCATCATCA AGACCTTCGC CTCCCACGGA GCGGACTTCG TGCTGCCGGA CCGGGCGCAG
GTCACGATGA CGGTGCCGTT CATGCGGGCC TACACCGAGT TGCTGGTGCG CACGTGTCAC
AAGCGCGGTG CACACGCGAT CGGTGGGATG GCGGCGTTCA TCCCGAGTCG GGACCCGGAG
GTGAACGCGA CCGCGTTGGA GCGGGTGCGG CAGGACAAGG AACGCGAGGC CGGCGACGGT
TTCGACGGTT CGTGGGTCGC CCACCCCGGA CTCGTGCCGG TGTGTCGCGA GGTGTTCGAC
GAGTTCTTGG GCGGGTGGCC GAATCAGCTC GGCAGACTGC GTGAGGACGT CGCCGTCACG
GCGCACGACC TGCTCGACGT GGTGAGCGCG GGTGGCGAGG TCACCGAGCA GGGCGTCCGA
TCGAACATCA ACGTGGCTCT GCGTTACATC GATGCGTGGC TGCGCGGTAC GGGCGCCGCG
GCGATCTTCA ACCTCATGGA GGACGCCGCC ACGGCGGAGA TCGCCCGGTG TCAGGTGTGG
CAGTGGGTCC GCAACGGCAC GAAACTGGCC GACGGCACCG CGGTCACGCG TGAGCGGGTG
ACGGAGTGGT TGGACATCGA GCTCGCGGCC GTGTACGCCG ATCTCGGTGC GGACAACCGG
CTCAGTGAGG CCCGGGAGAT CTTCGTCGAG ACGGCGCTGG GTGAGAAGCT GCCGAGTTTC
TTCACCACGG GTGCCTATGC GCGGTACTTG ACAACGCCGA GCTGA
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| Protein sequence | MADTVNGRLQ VAGPMRERYD EILTPAALEF VAKLDNTFAG RRRELLDERR RRRERLASGE
ETLGFLPQTQ RIRNDETWQV APPAPGLEDR RVEITGPPDR KMTVNALNSG AKVWLADFED
ATSPTWHNIV SGQLNLYDAI RRNIDFTDRG KRYVIGDEPA TIVARPRGWH LVEKHIRIDG
RPVSASLVDF GLYFFHNARQ LLARGSGPYF YLPKLESHLE ARLWNDVFLL AQEELGIPRG
SIRATVLIET ITAAFEMDEI LYELREHAAG LNAGRWDYIF SIIKTFASHG ADFVLPDRAQ
VTMTVPFMRA YTELLVRTCH KRGAHAIGGM AAFIPSRDPE VNATALERVR QDKEREAGDG
FDGSWVAHPG LVPVCREVFD EFLGGWPNQL GRLREDVAVT AHDLLDVVSA GGEVTEQGVR
SNINVALRYI DAWLRGTGAA AIFNLMEDAA TAEIARCQVW QWVRNGTKLA DGTAVTRERV
TEWLDIELAA VYADLGADNR LSEAREIFVE TALGEKLPSF FTTGAYARYL TTPS
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