| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27730 |
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| Symbol | |
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| ID | 8388097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2998758 |
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| End bp | 2999621 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976804 |
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| Product | amino acid ABC transporter membrane protein |
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| Protein accession | YP_003134581 |
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| Protein GI | 257056749 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.947146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.303953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TCCTGTTCGA CGTCCCGGGG CCGAAGTCGC GGGTACGGCA CCGCCTGTAC
GCGGTGGTCG GAGTACTCGC CATCGCGGCG GTCATCGGCT ACGTCGTCTA CAAGTTCGCC
GAAGCCGGCC AGTTCGACGC CGACATCTGG GAATGGGTCC TCTACAAGCA GATCCAGCTG
GAAGTGCTCG CGGCGCTGGG CAACACGGTG AAGGCATTCG CCACGGCGGC GGTGTTGGCG
CTCGTCTTCG GTGCGATCTT CGCGACCGCC AGGCTGTCCG ATTACGCGGT CATCCGGGTT
CCCGCCATGC TCGTCGTGGA GTTCTTCCGG GCCGTACCGC TCGTGGTGAT GATCTTCTTC
TTCCACTACG GACTGGCCCT GGGAGCACCG TTCTACTCCG TTGTGCTCGG TTTGACCCTG
TACAACGGTG CGGTGTTGGC CGAGGTGTTC CGCGCCGGAA TCCTGTCGTT GCCGAAGGGG
CAGAGCGAAG CCGCCTACGC CATCGGCATG CGCAAGTCGC AGGTGATGCG GCTGGTGTTG
CTGCCGCAGG CCCTGCGCGC GATGATGCCC GCGATCATCA GCCAACTCGT GGTGCTGCTG
AAGGACACCG CGCTGGGCTT CCTCATCACC TACGAGGAAC TGCTGCTCTA CGCCCGCTAC
CTCGGCAGCA TGCTCGAATT CGACCGGCCG TTGATTCCGA TCACCATCGT GGTCGGTGCC
ATGTACATCA TCATGTGCCT GGCTTTGACG GGCGTGGCGA AGTGGCTCGA GACACGTAAC
CGACGCAGCA AGAAGACGAT CGTGGCGGAC GGCAAGGCCG AGACCGAGGA GGGTGTGCTC
ACCCCCGACA GCAGGCCGGT GTGA
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| Protein sequence | MSAVLFDVPG PKSRVRHRLY AVVGVLAIAA VIGYVVYKFA EAGQFDADIW EWVLYKQIQL
EVLAALGNTV KAFATAAVLA LVFGAIFATA RLSDYAVIRV PAMLVVEFFR AVPLVVMIFF
FHYGLALGAP FYSVVLGLTL YNGAVLAEVF RAGILSLPKG QSEAAYAIGM RKSQVMRLVL
LPQALRAMMP AIISQLVVLL KDTALGFLIT YEELLLYARY LGSMLEFDRP LIPITIVVGA
MYIIMCLALT GVAKWLETRN RRSKKTIVAD GKAETEEGVL TPDSRPV
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