Gene Svir_27500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27500 
Symbol 
ID8388074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2971163 
End bp2972005 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID644976781 
Productrhodanese-related sulfurtransferase 
Protein accessionYP_003134558 
Protein GI257056726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCG TTATCTCGAC TGCCGAACTC GCCGACTTAC TCGACTCCGA TCACCCTCCG 
ACAGTGCTCG ACGTGCGTTG GCGTCTCACC GGTCCGTCGG GACGTGATTC CTACGAGAGA
GGACACGTTC CGGAAGCTGT GTTCGTGGAC GTGGACACCG AACTATCGGG AAAGCCTGGT
ATCGAGGGTA GACATCCGCT GCCCGAACCG GCCGTTTTGC AACGCACGTT ACGTGCCGCC
GGGGTGAGCG GTTCCCGACC CGTGGTGGTC TATGACGACG GGGACGGTTC CGTGGCGGCG
AGGGCGTGGT GGTTGTTGAG GTGGGGTGGA CATCGTCGGG TGGCGGTGCT CGACGGTGGT
TTCGCCGCGT GGTCGGCGGA GGGCCGCCCG GTCGAGACGA ACATCGTCCG ACCCGAGCCG
GGTGATGTCG TGATCCGGCC GGGGGCGCTG CCTGTCCTCG ATGCCGATGA CGCCGCGTCA
CTGGCCCGCA GCGGTGTGTT GCTCGATGCT CGCGCTCCGC AGCGGTATAC GGGTGAGGTG
GAACCGGTGG ACCCGAAGGC CGGACATGTG CCCGGGGCGA TCAATTCGCC GTTCACCGAG
CACCTCGACG AGAACGGTCG GTGGCGTTCG GCCGAGGAAC TGGCACGACA CTTCGCCGAA
CTCGGCGTCG GACCGGAGAC CCCCGTGGGG GTGTACTGCG GGTCCGGGAT CACGGCGTGT
TCGGTCGTGC TCGCTTTGGA ACTCGCGGGA CACCCGCGGC CCGCGGCTCT GTACGCGGGT
TCGTGGTCGA ACTGGGTCGC CGACCCGGAC AGGCCGGTCG CCACAGGGCC GCAACCCGGC
TGA
 
Protein sequence
MRPVISTAEL ADLLDSDHPP TVLDVRWRLT GPSGRDSYER GHVPEAVFVD VDTELSGKPG 
IEGRHPLPEP AVLQRTLRAA GVSGSRPVVV YDDGDGSVAA RAWWLLRWGG HRRVAVLDGG
FAAWSAEGRP VETNIVRPEP GDVVIRPGAL PVLDADDAAS LARSGVLLDA RAPQRYTGEV
EPVDPKAGHV PGAINSPFTE HLDENGRWRS AEELARHFAE LGVGPETPVG VYCGSGITAC
SVVLALELAG HPRPAALYAG SWSNWVADPD RPVATGPQPG