Gene Svir_27310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27310 
Symbol 
ID8388055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2948535 
End bp2949392 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID644976762 
Producthypothetical protein 
Protein accessionYP_003134539 
Protein GI257056707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTATA TCGTCCTTCT GCTGGTGCTG ACGGCCCTGG GGCTGGTAGT GGCGGCACTC 
GTCACGGTCA GTTCACTGTG GGCCTGGGTG TCGATCGTCG CTTCGGGTCT TGCCGGAGCG
CTGTTGGTGG TCGACTGGGC GCGTCGACGA CTGCGGAACT CGACACGGAA AACGTCCGAG
AAGCCCGAGT CTTCCGGCGA ATCGGAGTCC GGTTCGGACG GGGAACGCGA CGGTGACCGT
GCCGACGGCA TCGCCCGAGA CGGCACCGAC GGTGCCGAGA CCGCGGAATC GGAGCAGACC
ACTCGCACCG TCTCGGACGT CTCGGCCGTC GCCGGGACGG AGCCAGCCGA GGCAGTGACA
GCCGAGGCAA CCATGGCCGA TGAGGGTTCG GTATCGGCCG GTGATGCGGT GTCCGCGAAG
TCCGCCACAA CGTCCGAAAC CTCCGGCCGC GCGCGGTTCG AGTCCGCCCG CACGGTGTAC
GCGGGTGCCT TGACGGCATC GACTCGGGAG CCGGTGGTCC GGGAGGGCGT GGACAGCCTC
ACCGATACGG CGCCGCGCAC CGCGCTGTTG GCTTCGTCGG GTGAGCTCGC CGGTGCCGAT
GTCGATCCCC CCGAGGAGGA GACCAGCCCC GAAGACGCGC TGTTGGTGGC GAAACTCGAA
GTCGAGGTGC TCGTCGTGGA CGAGTATCCG CGCTACCACC TGGCCGACTG TTCCTGGCTC
GGCTCCAGGG CGACGATCCC GCTCGCGGTG AAGGAAGCGC GTGACCTCGG GTTCACTCCC
TGTGGGCTTT GTGGCCCGGA TGCGTTGTTG GCGGCCAACC ACCGCAAGCG ACGTCTCTCG
CGCCGCAACA CGATGTAG
 
Protein sequence
MLYIVLLLVL TALGLVVAAL VTVSSLWAWV SIVASGLAGA LLVVDWARRR LRNSTRKTSE 
KPESSGESES GSDGERDGDR ADGIARDGTD GAETAESEQT TRTVSDVSAV AGTEPAEAVT
AEATMADEGS VSAGDAVSAK SATTSETSGR ARFESARTVY AGALTASTRE PVVREGVDSL
TDTAPRTALL ASSGELAGAD VDPPEEETSP EDALLVAKLE VEVLVVDEYP RYHLADCSWL
GSRATIPLAV KEARDLGFTP CGLCGPDALL AANHRKRRLS RRNTM