Gene Svir_27160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27160 
Symbol 
ID8388040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2930277 
End bp2931269 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID644976748 
Productaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein 
Protein accessionYP_003134525 
Protein GI257056693 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGT TCGAGTACTC CAAGGCCACC GACGCCGAAG CCGCTGTGCG CACGGTGACG 
GGCAACGGTC GAGCCGCGTA CCTCGCGGGT GGGACCAACC TCGTGGACCA CATGAAGTTG
GGCATCACCG CTCCGGAACT GCTCGTCGAC ATCACCGGGC TGTCACTCGA CGCCATCGAG
GAGCTCCCCG ATGGCGGTGT GCGCATCGGC GCCGGTGCCC GCAACAGCGA CGTCGCCGCT
CATCCTCTGG TGCGTAGCCG GTACCCGGTG TTGTCGCAGG CGTTGCTGCA GGGCGCGTCG
GGACAACTGC GCAACCTCGC CACAGTGGGT GGCAACCTGC TGCAACGCAC CCGCTGTGTC
TACTTCCAGG ACATCACCAC CCCCTGCAAC AAACGTTCCC CCGGCGAGGG GTGTTCGGCC
CTCGACGGCT ACACGCGGTA TCACGCAGTG CTCGGCGCCT CCTCCCATTG CGTCGCGGTG
CACCCGTCCG ATCTGGCCGT CGCGTTGACC GCGCTGGACG CCGTGGTCCG TATCCGCACC
GCCGACGGTG AGCGAACGGT GCCCGCGGCC GAGTTGCACC GACTCCCGGG TGAACACCCC
GAGCGGGACA CCGTGCTCGA GCACGGCGAA CTCATCACCG CCGTGGACCT GCCTCCACTG
CCGTTCGCCG CACGATCGTG CTACCGCAAG GCCCGGGACC GGGCGTCGTA CGCGTTCGCG
CTGGTCTCCG TGGCCGCGGC CCTCGACGTC ACCGACGGAG TGGTGCAGGA CGTGCGGATC
GCGTTCGGCG GGCTCGCACA CAAACCCTGG CGGGCGATCT CGGCGGAACG CACGCTGCGC
GAGGCCGAGG CGACCTCGGG GAGGTTCAAG GAGGCAGCCG ACGTGGAACT CGCCGATGCG
AGGACGTTGC GAGACAACGC GTTCAAAGTC CCGATGGCAC GCGCGATGCT CGTCACCGTT
CTCCGAAGCC TGGCGGAGGA GGGTGCCACG TGA
 
Protein sequence
MIPFEYSKAT DAEAAVRTVT GNGRAAYLAG GTNLVDHMKL GITAPELLVD ITGLSLDAIE 
ELPDGGVRIG AGARNSDVAA HPLVRSRYPV LSQALLQGAS GQLRNLATVG GNLLQRTRCV
YFQDITTPCN KRSPGEGCSA LDGYTRYHAV LGASSHCVAV HPSDLAVALT ALDAVVRIRT
ADGERTVPAA ELHRLPGEHP ERDTVLEHGE LITAVDLPPL PFAARSCYRK ARDRASYAFA
LVSVAAALDV TDGVVQDVRI AFGGLAHKPW RAISAERTLR EAEATSGRFK EAADVELADA
RTLRDNAFKV PMARAMLVTV LRSLAEEGAT