Gene Svir_26650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26650 
Symbol 
ID8387989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2870936 
End bp2871472 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID644976699 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003134476 
Protein GI257056644 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.127032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0446765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAATCA CCGACTCCCT GCCCGTCACC CACGACGGAG TGCTGTTGCG CCCGCTGGCC 
GAAATCGACG CCGAGGCCTA CGCGGCCGGA ACGAAGGACC CCACCGTGCG GCGCTACGCC
CATCTGCCCC TGCCCGAGTA CACGCCCGAG ACCGTGCGCG ACCTCGCGCG CGGCGAAGTC
CGAAAAGGAC TGGAAAGTGG ACGTCTCGCG GTCCTGAGCA TCCTCGACGC GACGACCGAG
GCGTTCTTCG GCAGCCTGGT GCTGTTCGAC GTCACAGAAC ACGAGGCGGA AGTCGGCTTC
TGGCTTTCCC CGCACGCCCG AGGCCACGGC GTGGCGAGGC GAGCGCTGGC CGCGGCGACC
CGGCTCGCCC GGCGACTCGG ACTCCGCTCC CTCACCGCCC GCACCGACCC GGAGAACACC
GCGTCCCGCC GCACGCTCGA GGCCGCCGGT TTCCACCCCG AGGGAGAACC CCAGCGGAGC
ACGACCCCGT CGGGCGCCCA CGTCACCACC CAGCACTATC GCCTGCCCCT GGAGTGA
 
Protein sequence
MGITDSLPVT HDGVLLRPLA EIDAEAYAAG TKDPTVRRYA HLPLPEYTPE TVRDLARGEV 
RKGLESGRLA VLSILDATTE AFFGSLVLFD VTEHEAEVGF WLSPHARGHG VARRALAAAT
RLARRLGLRS LTARTDPENT ASRRTLEAAG FHPEGEPQRS TTPSGAHVTT QHYRLPLE