| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26550 |
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| Symbol | |
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| ID | 8387979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2862983 |
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| End bp | 2863834 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976693 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_003134470 |
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| Protein GI | 257056638 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.146126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTGC CCGGCTCGGT CGGGGTGATC GGCGGTGGGC GCATGGGCGC CGGCATCGCC
CAGGTGTTCG CGACCCACGG GGCAGCGGTA TCCGTTGTGG AGAGTGATGA GTCGGCGGCT
GTCGCGGCGC GGGAGCGGAT CGCCGAGGGA CTGGCCAAGG CGGCCGAGCG CGGCAAGCTG
TCCCGGCAGC CCGACGTGAT CCTGGAGCGG GTGACGGTCC TCGGTGATCT GACACGGCTT
CCCGCGGAGG CCGAACTCGT CGTCGAAGCG GTGCCGGAAC GTGTCGAGCT CAAGATCGAC
GTACTGACCC GCGCCGAGTC CGTCGTGTCC GACCACGCGG TCCTGGCCAG CAACACCAGC
TCGTTGTCCA TCACCGAACT CGGTGCCGCC CTGCGCGAGC CGAGGCGTTT CCTCGGAATG
CACTTCTTCA ACCCGGTGCC GCCGTCGAAG CTGGTCGAGG TGGTGACCGC GCCGCAGACC
GACGAGACGG TGACCCGCCG GGTGCGGGAC TGGGTGCGGG CACTCGGCAA GACCGATGTC
GTCGTCCGCG ACTCGCCGGG ATTTGCCACC AGTCGGCTCG GGGTCCTGTT GGGACTGGAG
GCGATCCGGA TGCTCGAGGA GGGGGTCGCC GACGCCGAGG CCATCGACAA CGCGATGGAG
CTCGGTTATC GCCACCCGAT GGGACCGTTG CGCTCCACCG ACCTGGTGGG TCTCGACGTG
CGATTGGCGA TCGCCGAGTA CCTGCATTCC ACCCTGGGGG AACGCTTCGC GCCGCCGCGG
TTGCTGCGCG ACAAGGTCGC GGCGGGCGAG TTGGGTCGTA AGACGGGACG CGGTTTCTTC
GAGTGGCGGT GA
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| Protein sequence | MGVPGSVGVI GGGRMGAGIA QVFATHGAAV SVVESDESAA VAARERIAEG LAKAAERGKL
SRQPDVILER VTVLGDLTRL PAEAELVVEA VPERVELKID VLTRAESVVS DHAVLASNTS
SLSITELGAA LREPRRFLGM HFFNPVPPSK LVEVVTAPQT DETVTRRVRD WVRALGKTDV
VVRDSPGFAT SRLGVLLGLE AIRMLEEGVA DAEAIDNAME LGYRHPMGPL RSTDLVGLDV
RLAIAEYLHS TLGERFAPPR LLRDKVAAGE LGRKTGRGFF EWR
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