Gene Svir_26520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26520 
Symbol 
ID8387976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2859591 
End bp2859875 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content66% 
IMG OID644976690 
Productphenylacetate-CoA oxygenase, PaaH subunit 
Protein accessionYP_003134467 
Protein GI257056635 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3460] Uncharacterized enzyme of phenylacetate metabolism 
TIGRFAM ID[TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.217655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.197294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC GATGGCCGCT GTACGAGGTG TTCGTGCGCG GGAAGCGGGG CCTCAACCAC 
GTGCACGTCG GGTCGCTGCG TGCCCCCGAC GACCGGATGG CCCTGCACCA CGCGCGCGAT
CTCTACACCC GACGTAACGA AGGGGTCAGC ATCTGGGTGG TCAAGGCGGC CGACATCACC
GCTTCCAGCC CCGAGGAGAA GGACCCCTTC TTCGAGCCGA GTGCCGACAA GGTGTACCGG
CATCCGACGT TCTACGACAT CCCCGACGAC GTCCCACACA TGTGA
 
Protein sequence
MSERWPLYEV FVRGKRGLNH VHVGSLRAPD DRMALHHARD LYTRRNEGVS IWVVKAADIT 
ASSPEEKDPF FEPSADKVYR HPTFYDIPDD VPHM