| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26210 |
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| Symbol | |
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| ID | 8387945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2825330 |
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| End bp | 2826262 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976659 |
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| Product | ABC-type proline/glycine betaine transport system, permease component |
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| Protein accession | YP_003134436 |
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| Protein GI | 257056604 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGACG TGCCCACCAT CCCCGTCGGT TCGGCGGTCG ACACCGCCAT CCAATGGCTC
ACCACCCACG CCGGAGGACT GTTCGACGCG ATCTCCGCGG TGCTGTTCTT CCTGGTGAAC
CTGATCTACG GCGTGCTGGC CGCCCCACCG TCCCTCGTCC TCGTCGTCAT CTTCGGCGCG
CTCGCGGCGT TGTGCGTCCG CAGCGTGGGG ATGACGGTCT TCGCCGTCCT CGCGTTCCTC
CTCATCGACA GCATGCAACT GTGGCACCAG ATGCTGCAGA CGCTGTCGGT CGTCGTGCTC
GCGGCGTTGA TCGCCATCGT CGTCGGGGTG CCCGTCGGCG TCCTCGCCGC CAAGAGTCCG
AAGACGGGTC TCGTCGTACG ACCGGTCCTC GACTTCATGC AGACGCTGCC CGTCTTCGTC
TACCTGGTCC CGGCGGTGTT CTTCTTCGGT ATCGGCGTGG TCCCCGGGAT CGTGTCGACG
ACGGTGTTCG CGGTACCACC GGCGGTACGA CTGACCGAGC TGGGCATCCG GCAGGTCGAC
CGGGAGACGG TCGAGGCCGC GCGGGCCTTC GGGGCACGGC CGAGGCAGGT ACTCCGGGAG
GTCGAACTCC CGCTGGCGGT CCCGTCCATC ATGGCGGGCG TCAACCAGGT GATCATGCTC
GCGCTGTCGA TGGTCGTGGT CGCCGGTCTC GTGGGCGCCG AGGGACTCGG CGGCGTCGTC
GTCGAGGGCG TGACTCAGCT GAACATCGGC GCGGCCTTCG AAGGCGGCAT CGCCGTGGTC
ATCCTGGCCG TCTATCTCGA CCGCATCACC AGTGCCGCCG GTCGAGGCCG AAAGCGGAGG
AAACGCACCG CCCGCACCGT CCCGACCCGT CGCTTCGGTG GTCGACGGGA GCTTTCCCCG
GAATCGTCCG ACAACCTCGT CGCAACGCAC TGA
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| Protein sequence | MTDVPTIPVG SAVDTAIQWL TTHAGGLFDA ISAVLFFLVN LIYGVLAAPP SLVLVVIFGA
LAALCVRSVG MTVFAVLAFL LIDSMQLWHQ MLQTLSVVVL AALIAIVVGV PVGVLAAKSP
KTGLVVRPVL DFMQTLPVFV YLVPAVFFFG IGVVPGIVST TVFAVPPAVR LTELGIRQVD
RETVEAARAF GARPRQVLRE VELPLAVPSI MAGVNQVIML ALSMVVVAGL VGAEGLGGVV
VEGVTQLNIG AAFEGGIAVV ILAVYLDRIT SAAGRGRKRR KRTARTVPTR RFGGRRELSP
ESSDNLVATH
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