| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25960 |
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| Symbol | |
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| ID | 8387920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2798137 |
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| End bp | 2800842 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976636 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003134414 |
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| Protein GI | 257056582 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCCA AGCAGAACAC CTCCGTAGCG CACGACACAC CCCGGCTGTT GCTCATCGAC
GGACACTCGA TGGCCTACCG GGCCTTCTTC GCGGTGCCCG CCGACCGGTT CAGAACCTCC
ACCGGGCAGG TCACCAACGC GGTGTTCGGG TTCACGTCGA TGCTGATCAA CCTGCTCCGC
GACGAGGCCC CCACGCATGT GGCCGTGGCC TTCGACGTGT CCCGGAAGAC GTTCCGCTCG
GAGACGTTCG CCGACTACAA GGCCAACCGC CTCGCCACAC CCGACGACTT CAAAGGCCAG
GTGGAGCTCA TCAAGGACGT CCTCGGAGCC CTGTCGATCC CGGTTCTGGC CGTGGAGGGC
TACGAGGCCG ACGACGTCAT CGCCACGCTC ACCGCGAAGG CGGGCGACGA CTACGAAGTG
CTGATCTGCA CCGGCGACCG GGACGCCCTG CAACTGGTCA CCGACTCGGT GACCGTCCTC
TATCCGCGCA AGGGCGTGTC CGATCTGGTG CGTTTCGACC CCGAGGGCGT GCAGGAGAAG
TACGGCCTGT CGCCCGCGCA GTACCCGGAC TTCGCCGCGT TGCGAGGTGA TCCGTCCGAC
AACCTGCCGG GCATTCCCGG TGTGGGCGAG AAGACGGCGG CGAAATGGAT CAGGCAGTTC
GGTTCCCTCG GCGAGCTCAT CGACCGGGTC GACGAGGTGA AGGGCAAGGT CGGTGAGGCG
CTGCGTTCGC ACCTCGACTC GGTGATGCTC AACCGGCAAC TCACGGAACT GGTGCGCGAC
GTGCCGCTGG AGGTCACGCC GGACGACCTC GCCTTGAAAC CGTGGGACCG CGACGCGGTG
CACCGACTGT TCGACGAGCT GGAATTCCGG GTGCTGCGCG ATCGGCTGTT CGCGTCGTTG
TCCAGCACGG AGCCGGAGGC CGACTCCGGG TTCGAGGTCG AGGGCGCGGC GTTGCAGCCC
GGCACGGTGG GCGAGTGGCT GTCCCAGCAC GCCAGCGGCG GCACGACCGT CGGACTGGCC
TTCTCCGTCA CCGGCGCGTC GGTGACGTCC GACGTGCAGT CCGTGGCGTT GGCCGCCCCC
AACGGTGAGG GTGCCTACCT CGACGTCACG ACGTTGACCG AGGACGACGA ACGCGCGCTC
GGCGAATGGT TGGCCGACGA GAACATCCAC AAGGTGGGGC ACTCGCTGAA GAAGGCGCTG
CACGGCCTGC GCTCCCGAGG CTGGCGCCTC GCCGGACTGG TGATGGACAC CGAACTCGCC
GCGTATCTCG TCCGACCGGG ACAGCGGTCG TTCAAGTTGG ACGACCTCGT GTTGCGCTAC
CTGGGCAAGG AATTGCGTTC CGAGGGCGTG GAGGGTGACG GGCAGTTGTC GTTGCTCGAC
ACCGACTCCG ACAACGAGAT CGTGCGACGG GAGCTGGTGC GGGCTCGGGC GGTCCTGGAG
CTGTCGTCCG CGTTGTCCGC CGAACTCGCC GCCATCGGCG CCACCACACT GCTGGCCGAC
ATCGAGCTCC CGCTGCTGTC GATGATCACC GACCTGGAGG CCGCCGGCAT CGCCGTGGAC
ATCGACGTGC TCACCGAGCT CGAAGCGCAC TATGCGAACC GCGTGAAGCA GGCGACCGAG
CAGGCGTACT CGGTGATCGG CAAGCAGATC AACCTCGGCT CGCCGAAGCA GTTGCAGGTG
GTGCTGTTCG ACGAGCTGGG CATGCCCAAG ACCAAGCGCA CCAAGACCGG CTACACCACC
GACGCCGACG CGCTGCAGAC GCTGTATGAG AAGACGGAAC ACCCGTTCCT GCAGTACCTG
CTCGAACATC GCGACGCGAC GAAGCTGCGC AGTACGGTCG AGGGCCTGAT CAAGGCGGTC
GCCGACGACG GACGTATCCA CACCACCCTG CACCAGACCA TCACGGCGAC GGGCCGGCTG
TCGTCGGTGG ACCCGAACCT GCAGAACATC CCGGTGCGTA CCGACGAGGG ACGTCGCATC
CGTGAGGCGT TCGTGGTCGG CGAGGGGTAC GCCGAACTCA TGACCGCCGA CTACAGCCAG
ATCGAGATGC GCATCATGGC GCACCTGTCG AACGACGAGG CGCTCATCGA AGCGTTCCAC
TCGGGCTTCG ACTTCCACGC CGCGACGGCC GCTCGGGTGT TCGACGTCGA TCCCACCGAG
GTCACCGGCG AACAGCGCGC GAAGATCAAG GCGATGAACT ACGGACTCGC CTACGGGCTG
TCCGCCTACG GGCTGTCGCA GCAGCTGCGC ATCTCCACCG AGGAGGCGCG GGCCCTGATG
GACGAGTACT TCCTGCGCTT CGGTGGCGTG CGTGATTACC TGCACAGCGT GGTGGAGCGT
GCGGCCAAGG AGGGCTACAC CGAGACGATC TTCGGTCGGC GTCGTTACCT GCCCGATCTC
ACCAGCACCA ACCGGCAACG CCGGGAGATG GCCGAACGCA TGGCCCTCAA CGCCCCGATC
CAGGGCAGCG CCGCTGACAT CATCAAGGTC GCGATGCTCG GGGTGCACCG GGCACTCGCC
GAAGCCGGAC TGCGCAGCCG GGTGCTGTTG CAGGTGCACG ACGAGCTGAT GCTGGAAGTC
GCCGACGGCG AGCACGCCCA GGTCGAGGAA CTGGTGCGCC GGGAGATGGG GTCGGCGTAC
GAGCTGTCGG TGCCGTTGGA GGTCTCGGTG GGGTACGGCC GCTCGTGGAA CGACGCCGCT
CATTGA
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| Protein sequence | MSSKQNTSVA HDTPRLLLID GHSMAYRAFF AVPADRFRTS TGQVTNAVFG FTSMLINLLR
DEAPTHVAVA FDVSRKTFRS ETFADYKANR LATPDDFKGQ VELIKDVLGA LSIPVLAVEG
YEADDVIATL TAKAGDDYEV LICTGDRDAL QLVTDSVTVL YPRKGVSDLV RFDPEGVQEK
YGLSPAQYPD FAALRGDPSD NLPGIPGVGE KTAAKWIRQF GSLGELIDRV DEVKGKVGEA
LRSHLDSVML NRQLTELVRD VPLEVTPDDL ALKPWDRDAV HRLFDELEFR VLRDRLFASL
SSTEPEADSG FEVEGAALQP GTVGEWLSQH ASGGTTVGLA FSVTGASVTS DVQSVALAAP
NGEGAYLDVT TLTEDDERAL GEWLADENIH KVGHSLKKAL HGLRSRGWRL AGLVMDTELA
AYLVRPGQRS FKLDDLVLRY LGKELRSEGV EGDGQLSLLD TDSDNEIVRR ELVRARAVLE
LSSALSAELA AIGATTLLAD IELPLLSMIT DLEAAGIAVD IDVLTELEAH YANRVKQATE
QAYSVIGKQI NLGSPKQLQV VLFDELGMPK TKRTKTGYTT DADALQTLYE KTEHPFLQYL
LEHRDATKLR STVEGLIKAV ADDGRIHTTL HQTITATGRL SSVDPNLQNI PVRTDEGRRI
REAFVVGEGY AELMTADYSQ IEMRIMAHLS NDEALIEAFH SGFDFHAATA ARVFDVDPTE
VTGEQRAKIK AMNYGLAYGL SAYGLSQQLR ISTEEARALM DEYFLRFGGV RDYLHSVVER
AAKEGYTETI FGRRRYLPDL TSTNRQRREM AERMALNAPI QGSAADIIKV AMLGVHRALA
EAGLRSRVLL QVHDELMLEV ADGEHAQVEE LVRREMGSAY ELSVPLEVSV GYGRSWNDAA
H
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