Gene Svir_25740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25740 
Symbol 
ID8387898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2770853 
End bp2772223 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content65% 
IMG OID644976614 
ProductNa+/H+ dicarboxylate symporter 
Protein accessionYP_003134392 
Protein GI257056560 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGGAC CGTCACCCAC GGCTACGGAT CAGCCGAACC AGCCACAACG CCGTGACCGG 
ATGCACTACC TGTATCTGGC CGTCATCGCC GCGGTGGTGC TGGGTGTCGT CGTCGGCTTC
GCCGCCCCGG ATGCGGCGAA GGAGCTCAAA CCACTGGGCA CCGGCTTCGT CGACCTGATC
AAGATGATGA TCAGCCCCAT CATCTTCTGC ACCATCGTGC TCGGCATCGG CTCCGTCGCG
AAGGCGGCCA GCGTGGGCAA GGTGGGCATG CTGGCCGTCG GTTACTTCAT GCTGATGTCG
ACCTTCGCGC TCGGCATCGG TTTGGTGGTC GGAAACATCC TTCACCCGGG CGAGGGCATG
GAGCTCGACC CGGAGGCGGC GGCCCAGGCG CAGGAGAGCG CCTCGAGCGG TGAGGGAACG
GTCGACTTCC TGCTCGGCAT CATCCCCGAG ACCATGGTGT CGGCGTTCAC CGACGGCTCG
GTGTTGCAGA CCCTCCTCGT GGCGCTGCTC ACCGGTTTCG CGTTGCAGAA GATGGGCCGC
AGCGGTGAAC CCGTGTTGCG CGGCATCGAG CACATCCAAC GACTCGTGTT CCGAGTCCTC
GCCATGGTCA TGTGGGCCGC ACCGGTGGGC GCGTTCGGCG CGATCGCGGC GGTTGTCGGT
GAAACCGGCT GGGACGCGCT GCGCAGCCTG GCCGTCATCA TGATCGGCTT CTACATCACC
TGTCTGCTGT TCATCTTCCT CGTGCTGGGC GCCGTGTTGT GGCTCGGCGC GCGGGTCAAC
ATCTTCAAAT TGCTGGGCTA TCTCGGCCGT GAATTCCTGC TGATCGTGTC GACCTCGTCG
TCGGAGTCCG CGCTGCCGCG ACTCATCGCG AAGATGGAGC ACCTCGGCAT CAGCAAGCCC
GTCGTCGGCA TCACGGTTCC CACCGGCTAC TCGTTCAACC TGGACGGCAC CGCGATCTAT
CTGACGATGG CCACCTTGTT CATCGCCACG GCGCAGGGCA GCCCGCTCGG GGTCGGGGAA
CAGATCTCCC TGCTGATCTT CATGGTCATC GCGTCCAAGG GTGCCGCCGG AGTCAGCGGG
GCCGGTATCG CAACGCTTGC GGGCGGCCTC CAGTCGCACC GTCCGGAACT CGTGGACGGG
GTGGGTTTCA TCCTCGGCAT CGACCGGTTC ATGTCGGAGG CCCGTGCGCT CACCAACTTC
GCGGGCAACG CCGTCGCCAC CGTCCTCATC GGATCGTGGA CCAAGGAACT CGACCGCGAG
CGTATGTCGC GTGTGTTGTC GGGCCAGAAG CCGTTCAACG AGGCCGCGCT CGTGGACGAT
CACGCTGCCT CGTCATCGAA CGAGGCAGGC GAAGCCCCGA CCCGAGTCTG A
 
Protein sequence
MPGPSPTATD QPNQPQRRDR MHYLYLAVIA AVVLGVVVGF AAPDAAKELK PLGTGFVDLI 
KMMISPIIFC TIVLGIGSVA KAASVGKVGM LAVGYFMLMS TFALGIGLVV GNILHPGEGM
ELDPEAAAQA QESASSGEGT VDFLLGIIPE TMVSAFTDGS VLQTLLVALL TGFALQKMGR
SGEPVLRGIE HIQRLVFRVL AMVMWAAPVG AFGAIAAVVG ETGWDALRSL AVIMIGFYIT
CLLFIFLVLG AVLWLGARVN IFKLLGYLGR EFLLIVSTSS SESALPRLIA KMEHLGISKP
VVGITVPTGY SFNLDGTAIY LTMATLFIAT AQGSPLGVGE QISLLIFMVI ASKGAAGVSG
AGIATLAGGL QSHRPELVDG VGFILGIDRF MSEARALTNF AGNAVATVLI GSWTKELDRE
RMSRVLSGQK PFNEAALVDD HAASSSNEAG EAPTRV