Gene Svir_25320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25320 
Symbol 
ID8387856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2726665 
End bp2727246 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID644976572 
Productacetyltransferase (GNAT) family protein 
Protein accessionYP_003134353 
Protein GI257056521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0377925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CTGACGTTCG TCCCGCCACC CTCGACGACG TCCCCGAGAT CGCTCGGATC 
CAGCTCGTCA CCTGGCGCAC GGCCTACGGC GACGCCCTCG GTCCCTCGGT CGTCGACGCA
CTCACCACGG ATGAGGTCGC AGCACGCTGG TCGGAAGCGA TCACACATCC GGACACCACC
GTCTACGTCG CGACCGAGGG CAGGTTCACG GTCGGGTTCT GCGTCGCGGG CGCCGCGCCG
GAGACGGAGG TCGCCGCCGC GGACGGCAGC CTGCCCGAGG ACGCCGCTCG CACCGGCCTG
ATCGGATCCC TCCTCGTGGA GCCCCGCTGG GGTAGACGTG GACACGGTGG GCGACTGCTC
GCCACGGCGA CGGCCGGACT CCGCGAGCAC GGAGCCGAAC GCGGCATCGC CTGGGTGATG
CAGTCGGACT CGGCGTCACT CGCCTTCTAC CGCAGCGTCG GCTGGGATCC CGACGGCACC
GTGCGCACCC TCGACACCGG CGAACGCACG ATCAAGGAGA TCCGACTCAC CGGAACGCTC
GATCTGCGAC TCGAGGACCC TGCGACGGTC GAATCGGCCT GA
 
Protein sequence
MTTADVRPAT LDDVPEIARI QLVTWRTAYG DALGPSVVDA LTTDEVAARW SEAITHPDTT 
VYVATEGRFT VGFCVAGAAP ETEVAAADGS LPEDAARTGL IGSLLVEPRW GRRGHGGRLL
ATATAGLREH GAERGIAWVM QSDSASLAFY RSVGWDPDGT VRTLDTGERT IKEIRLTGTL
DLRLEDPATV ESA