| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24940 |
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| Symbol | |
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| ID | 8387818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2686652 |
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| End bp | 2687506 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976534 |
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| Product | ABC-type multidrug transport system, permease component |
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| Protein accession | YP_003134315 |
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| Protein GI | 257056483 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.484855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCT CGACCGTGAC GGACCCGACC CGCTCCGCCT TGCCGGCCGG TCCATTCGCG
ACATTCCGTG CCGGACTGTC GGACGGAATG ACGATCTTCC TGCGTAATCT GCTGAAGCTC
AAGCACCAGC CCGAACAGAT CGTCGCGACC TTCGCGTTCC CGCTCATGTC GGTGATCCTG
TTCGGCTACG TGTTCGGTAG CGCCATCCCC ATTCCGGGCG GAGGAAACTA CCGTGAGTAC
CTCATGCCCG GGTTGTTCGT CATGAGCTCG GTCATGGGTG TCATGGGCTC GCTGATGGTG
ATCGCCAAGG ACAACAGCCT CGGTGTCATG GACCGGTTCC GTTCGATGCC CATGGCGCGC
TCGGCGGTGC CGTTCGGACA GACAGCAGCC GACTTGGTGA TCGCCGCCGG CAGTCTGACG
ATCATGGCGG TCTGCGGTCT GTTCTTCGGT TGGCGGGCGC ACAACGGGAT CGCGGCGACC
CTCGCCGGAT TCGGCCTCGT GCTCCTGTTG CAGTACGCCG TGTCCTGGGT GGGCGTCTTT
TTGGGTTCGC TGGCGAAGAA CGAGGAGACG GCCGCCCGCA TCGGTCCCCT CATCATGCCT
CTGACGATGA TCTCGAACGT CTTCGTCCCC ACCGACGGCA TGCCCACCGT TCTGCGGGCG
ATCGCCGATT GGAACCCCGT CAGCGCGGCC ACCGCCGCCT GCCGGGAACT GTTCGGCAAT
CCTGGCCTAC CCGTCTCCTC GGACGCCGCC TGGCCGCTTC ATCATCCGGT CCTGACGACC
GTCGGCTGGT GCGCGTTCCT GCTCGCGGTA TTCGTGCCGT TGTCGATTCG ACGGTTCCGC
AACGCGGGGC TCTGA
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| Protein sequence | MTTSTVTDPT RSALPAGPFA TFRAGLSDGM TIFLRNLLKL KHQPEQIVAT FAFPLMSVIL
FGYVFGSAIP IPGGGNYREY LMPGLFVMSS VMGVMGSLMV IAKDNSLGVM DRFRSMPMAR
SAVPFGQTAA DLVIAAGSLT IMAVCGLFFG WRAHNGIAAT LAGFGLVLLL QYAVSWVGVF
LGSLAKNEET AARIGPLIMP LTMISNVFVP TDGMPTVLRA IADWNPVSAA TAACRELFGN
PGLPVSSDAA WPLHHPVLTT VGWCAFLLAV FVPLSIRRFR NAGL
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