Gene Svir_24890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24890 
Symbol 
ID8387813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2681502 
End bp2681945 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID644976529 
Productpolyketide cyclase / dehydrase family protein 
Protein accessionYP_003134310 
Protein GI257056478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.370837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.466231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGC AGTCCACGCA GTCCATCGAG ATCGACGCCG CCCCGGACGA CATCATGGCG 
GTCATCGCCG ACCTGCCGGC GTACCCGGAG TGGGCGAAGG CCGTACGGCA GACCGAGATC
CTCGCCACCG ACGATTCGGG TCGGCCCGCC CAGGTGCGTT TCACCCTCGA CTCCGGCCCG
GTGAAAGACG TCTACACGCT CGCCTACGAC TGGGCCGACG ACGGTCTGTC GGTGAGCTGG
CGTCTGGTGA AAGGGCAGAT GCAGAAGGCG CAGGAAGGGC GTTATCTGCT GGAACCGCTC
GGCCCGAACC GCACCAGGGT GACGTACACG CTGTCGGTGG AACTCGCGCT TCCCATGATC
GGATTGCTGC GCCGCAAGGC CGAGAAAATG ATCATGGACA CGGCGTTGCG AGAGCTCAAA
CGACGGGTCG AGGGCCGAAG CTAG
 
Protein sequence
MAEQSTQSIE IDAAPDDIMA VIADLPAYPE WAKAVRQTEI LATDDSGRPA QVRFTLDSGP 
VKDVYTLAYD WADDGLSVSW RLVKGQMQKA QEGRYLLEPL GPNRTRVTYT LSVELALPMI
GLLRRKAEKM IMDTALRELK RRVEGRS