Gene Svir_24830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24830 
Symbol 
ID8387807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2676721 
End bp2677482 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID644976523 
Productesterase/lipase 
Protein accessionYP_003134304 
Protein GI257056472 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.421093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGT TCGCCGGCGC TGAACCCTTC GTCCACGACG GTTCTCCCGA GGTGGGAGTG 
CTCCTGTGCC ACGGATTCAC CAGCACACCG GCGACCATGC GGCCGTGGGG CGAATACCTG
GCCGAGGCCG GTTTCACCGT GCGCTGCCCC CGCTTGCCGG GACACGGCAC CAGCTGGCAG
GAGTGCAACC GAACCCGGTG GCCGGACTGG TACGGCTGCC TGCGCGACGA ATTCGCCGGA
CTCGCCCGCC GGTGCGAGTC GGTGTTCGTG TTCGGCCTGT CGATGGGGGG CACCCTCGCC
CTGCGGCTGG CCCAGGACCT CGGTGACGCC GTGCGCGGCC TGGTACTGGT GAACCCGTCG
GTGCTCACCC GCAGGCTCGA CGCCAAACTG GCCACGCTGT TGGCGCCGGT ACTGCCGTCG
GCGAAGGGGC TGGCGGGTGA CATCGCCAAA CCCGGGGTCG TGGAACTCGC CTACGACCGC
ACCCCGGTGC GTGCGCTGGC GAGCCTGACC CGACTCTGGA CGCTGGTCCG TCGCGACCTA
CCCCGGGTGA CCCAACCGCT GTTGCTCGTC CGATCAGCGG TCGATCACGT CGTGGAAGGT
GTCAACGCCA CCGTGGTGGC CGACAATGTG CGTAGTGAGG ACCTGCGCGA GGTAGTGCTT
CACCACAGCT ACCACGTGGC CACGCTCGAC AACGACGCAC CGTTGCTGTT CCGGCGCAGT
GTGGAGTTCG TCGACTCCGT CAGACAGGTT GGTGCCCGAT GA
 
Protein sequence
MPVFAGAEPF VHDGSPEVGV LLCHGFTSTP ATMRPWGEYL AEAGFTVRCP RLPGHGTSWQ 
ECNRTRWPDW YGCLRDEFAG LARRCESVFV FGLSMGGTLA LRLAQDLGDA VRGLVLVNPS
VLTRRLDAKL ATLLAPVLPS AKGLAGDIAK PGVVELAYDR TPVRALASLT RLWTLVRRDL
PRVTQPLLLV RSAVDHVVEG VNATVVADNV RSEDLREVVL HHSYHVATLD NDAPLLFRRS
VEFVDSVRQV GAR