| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24800 |
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| Symbol | |
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| ID | 8387804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2674013 |
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| End bp | 2675137 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976520 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_003134301 |
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| Protein GI | 257056469 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.550521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACG ACGCCTCTGC TGACATCGCC AACGCGGCCA CCACCGTCGA AACCTCTGAT
CCTCTGACCG CGTTGGACAA CCGCCGCACG ATGCGCATGA GTCCGTTGCT GTCGCCCGCG
CTGCTGCGTG CCGAACATCC CATCGACCCG GGTATCGCCA AAACCGTCAC CCTCGGCAGG
CGTGACACCG TGGACATCCT CGACGGCCGC GACGATCGCC TGCTCGTCGT GGTCGGCCCG
TGCTCCGTGC ACGATCCGGC CGCAGCCCTG CACTACGCCC GTCTGCTGTC CGAACACGCG
CAGCGGGTGT CCGATGCTTT GTGCATCGTC ATGCGTGTCT ACTTCGAGAA GCCCCGCACC
ACCCTCGGCT GGAAGGGCCT GATCAACGAT CCCGACCTCG ACGGCACCTA CGCCGTCAAC
AAGGGGCTGC GGCTGGCCCG ACAGTTGCTG TTGGACATCT CAACGCTCGG ACTGCCCGTC
GGATGCGAAT TCCTCGACCC GATCACCCCG CAGTACATCG CCGACACCGT CACCTGGGGC
TCCATCGGAG CACGAACCGC GGCCAGCCAG GTGCACCGTC AGTTGTGCAG CGCCCTGTCC
ATGCCCGTCG GCATCAAGAA CTCCACCGAA GGCGACGTCC AGGTGGCGGT GGACGCCGTG
CGGGCGGCGT CGGCGAGCCA CGTGTTCCCC GGGATCAACG CGGACGGGCT GGCGGCGCTG
GTGACCACAT CGGGTAACCC CGACTGCCAC GTCATCCTCC GGGGCGGCTC GTCGGGGCCG
AACTACGACG CCGAGACGGT GTCCGACACC TTGTCCCGAC TGCGCAAGGC TGGGCTGCCC
GAGCGGGTGA TCATCGATGC GAGCCACGGC AACAGCCGCA AGGACCACGT GCGCCAAGCG
GCCGTGGTGC GCGAGCTCGC CGAGCGGATA GCCACGGGCG AGCACGGCAT CGTCGGGCTC
ATGATGGAGA GCTTCCTCGA AGAGGGACGG CAGGATCTCG CGCTCGGTCA CCGTGACGAA
CTCGTCTACG GCCAGAGCAT CACCGACGCC TGCCTCAGCT GGTCCACCAC GGCGACCTTG
CTGGACGAAC TCGCCTCAGC CGTGCGGGCT CGCAGGGGGA ACTGA
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| Protein sequence | MPNDASADIA NAATTVETSD PLTALDNRRT MRMSPLLSPA LLRAEHPIDP GIAKTVTLGR
RDTVDILDGR DDRLLVVVGP CSVHDPAAAL HYARLLSEHA QRVSDALCIV MRVYFEKPRT
TLGWKGLIND PDLDGTYAVN KGLRLARQLL LDISTLGLPV GCEFLDPITP QYIADTVTWG
SIGARTAASQ VHRQLCSALS MPVGIKNSTE GDVQVAVDAV RAASASHVFP GINADGLAAL
VTTSGNPDCH VILRGGSSGP NYDAETVSDT LSRLRKAGLP ERVIIDASHG NSRKDHVRQA
AVVRELAERI ATGEHGIVGL MMESFLEEGR QDLALGHRDE LVYGQSITDA CLSWSTTATL
LDELASAVRA RRGN
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