Gene Svir_23650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23650 
Symbol 
ID8387689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2557572 
End bp2558324 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID644976414 
Productenoyl-CoA hydratase/carnithine racemase 
Protein accessionYP_003134196 
Protein GI257056364 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0542068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACCG AGGAAGTCCG CCCTGGCATC CTCCTGAGCC GACCCACCCG TCCGGGCAGG 
CTGGACTCGA TGAACACGGA GCTGATCCAA CGGCTCCGGG ACGCACTCGC CGAAGTGCGT
GACGACGCTG GCATACGAGC GATCGTGTTG ACCGGTAACG GTCGAGCCTT CTGCGCCGGA
TTGGACCTCA ACGGTCACGG CGAACCGCTG GGCACACGCG GCGTGGAAGG CGCTCCCCAG
GCGGGACTCC GGCCGCAGAA ACACATCGCG GTGGTCAACG GGTTCGCGCT CGGTGGCGGT
ACCGAAATCG TGCTGGCATG CGACCTCGCC GTCATCGACG AGACCGCCTC CCTCGGACTG
CTGGAGGTCC GGCGCGGACT GTTGACGGCC GCGGGCGGTG TGATCCGTTT GCAGCGGCAG
GTGCCGTTCA AGATCGCGGC CGAGATCGCG TTGACCGGTG AATCGATCAA CGCCGAACGC
GCACTGGAAC TCGGCCTGGT GAACCGCGTC GCCGAAGGGG ACCTCGCTCG ACGTGGCGCT
CCAGCTGGCG GAGATCATCG CCGCGAACGC CCCCTCTCGG CCCGCGAGAC CAGGCGTGTC
ATGCACGAGT CGGTGGCGGC CGGGTCCGAC TGGGACAAAG GCCCGTGGAA GGTGGGCAAC
GAGGCGATGA AGAAGGTGTT CGCCAGCGAG GACACGAAGG AGGGTGCGCG GGCGTTCGCC
GAGAAACGTA CACCGGTGTG GACCGGGAAG TAA
 
Protein sequence
MLTEEVRPGI LLSRPTRPGR LDSMNTELIQ RLRDALAEVR DDAGIRAIVL TGNGRAFCAG 
LDLNGHGEPL GTRGVEGAPQ AGLRPQKHIA VVNGFALGGG TEIVLACDLA VIDETASLGL
LEVRRGLLTA AGGVIRLQRQ VPFKIAAEIA LTGESINAER ALELGLVNRV AEGDLARRGA
PAGGDHRRER PLSARETRRV MHESVAAGSD WDKGPWKVGN EAMKKVFASE DTKEGARAFA
EKRTPVWTGK