Gene Svir_23530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23530 
Symbol 
ID8387677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2545323 
End bp2545847 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID644976404 
Producthypothetical protein 
Protein accessionYP_003134186 
Protein GI257056354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0377925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG GTGTGGAAGC CAGCGATCGC ATGATCGACA ATTGGACTCG CCAGCTTCAG 
GAACAGGCGC AGCGTTATCA GGCCATGGCC TCACGCGTGC AGGAAATCTC GGTCACCGCG
CGTGCGGCCG ACAATTCCGT CGAGGTGACC ATCAATTCCA AGGGGCTGTT GACCGATCTG
ACGATTTCCG AAAGTGCCCA GGGGAAGCGC ATGGGGGAGC TGTCCGCCCT GATCATGCGT
ACGGTGCAGG CGGCCCAAGC GCGCATCCCG GAACTCCTGC AGCAGGCGAT GGCCGAGACC
ATCGGAACCG AGGACCAGAC CGCCGCGAAG GTGTTCGAAG AGGCGAAGAA GACGTTTCCC
GATCCGCCCG AGGACGAGGA AACCCCGCCT GAATCTCAGC ATGAGATGCG TTTCGGCCCC
GAGGACGACG ACACACCGGC TCCACCACCG CCACCGCGGC CCACCCGTCG TCGTCCTCCC
GAGGACGACG ACGATGACTT CAGCGGTCGG TCCATCTTCT CCTGA
 
Protein sequence
MADGVEASDR MIDNWTRQLQ EQAQRYQAMA SRVQEISVTA RAADNSVEVT INSKGLLTDL 
TISESAQGKR MGELSALIMR TVQAAQARIP ELLQQAMAET IGTEDQTAAK VFEEAKKTFP
DPPEDEETPP ESQHEMRFGP EDDDTPAPPP PPRPTRRRPP EDDDDDFSGR SIFS