Gene Svir_23070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23070 
Symbol 
ID8387631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2482391 
End bp2483095 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID644976360 
Producthypothetical protein 
Protein accessionYP_003134142 
Protein GI257056310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.226475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATGT CGGGACGGGC TGACGACGTA CTCGTCGTGT GCCCACTGAC CGTGGAAGCG 
GTGAGTGTGT GGTGGGGACT GCGCGGCGGG GACGTCGTAC GCGCGGGGAT GCGCGCACGG
CGACGTTCGG CGGTGCTGGC GGCACTACGG CAGCGGCCCG AGGTCCCCGT CGTCGTGGCG
GGGGTGGCCT GTGCGCTCAC GTCCGCCACG CGTCCGGGGG ACCTGGTGGT CCCCGACGTG
GTGTGCTCGC CGCGCGGGAC GTGGGAGTGT GCCACCGCAC CGCTGCTGGC CTCGGTACTC
CGCGGGAACG GGCACACCGT CCACCGTGGC GCTCTCGTGG AGTCCGACCG GGTGGTCTGG
CGGGTGCGAC GGGGGACGGC GGCGGTGGAG GACGACGTCC GCGAGTCCGG TGATCCCGTG
GCACTCGACC TGGAATCCGC TCTGCTTGTG GAACTGATCG AACAAGAAAG ACCGGCCGCG
GTACTGCGTG CGGTGGTGGA CACCCCGACA CGGCCGCTGG CGAGCCCGGC GACGATACCG
GGCGGTGCCG CGGCGTTGGC GGCGTTGGCG GCCTCGGGAC CCGCACTACG GGCGTGGGCG
ACCGTCGTTG CGCGCCGGAC GTGGACGAAC GACAGCGTTG TGAAGGAGGT GCGGCACCGA
TGGGTATGCC GTGGCACCAG AGTCTGCGCA TCGCGCGCTA CCTGA
 
Protein sequence
MAMSGRADDV LVVCPLTVEA VSVWWGLRGG DVVRAGMRAR RRSAVLAALR QRPEVPVVVA 
GVACALTSAT RPGDLVVPDV VCSPRGTWEC ATAPLLASVL RGNGHTVHRG ALVESDRVVW
RVRRGTAAVE DDVRESGDPV ALDLESALLV ELIEQERPAA VLRAVVDTPT RPLASPATIP
GGAAALAALA ASGPALRAWA TVVARRTWTN DSVVKEVRHR WVCRGTRVCA SRAT