Gene Svir_22930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22930 
Symbol 
ID8387617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2465277 
End bp2466263 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content71% 
IMG OID644976346 
Producthypothetical protein 
Protein accessionYP_003134128 
Protein GI257056296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.459753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.37663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACTC GACCACGCCG TGGACTGTGG GCGGTTCTCG CCGTGGCACT CTGTGCCGCG 
CTGGTCGCCA TCACCTGGGT GGTGACGTCC GACGGGGATT CGGAACGGTC CACGTCGACA
TCGCGGCCCC CACCCGGCAC GGCACGGTCC GACGTCCCAT CGGAACCACC GGCCGGTTCG
GTCCCCATCA CCGTCGTGAA GATCGACAAC GTGAGATCGG CGCGCCCGCA AACCGGCCTG
GACATCGCCG ATGTCGTCTA CGTCGAACCG GTCGAGGGTG GATACACCCG GCTGGCGGTC
GTGTACTCGT CGGAACTGCC CGACGTCGCC GGACCCGTGC GCAGTGCGCG GGAGACCGAT
GTCGAACTGC TGGCCCAGTA CGGGAACCCC TCACTGGTGT TCTCCGGAGC CGCGCCCGAG
ATCGAGCCCG TGCTGGCCGA ATCGGAGGTC CGACTCGTGC GGCACAGTGA CTACCCCGAC
GCGTTCTACC GCGAACCGGG TCGGCCCTCG CCGCACAACC TGTACGCGCG CCTCCCCCTG
CTGCCCCGGG TCGACGGGCC GGGACCCGAG CAGGTGCTGC CACGTGGCGA CACACCCCCG
GGTGGGCGGC CGATCGCCGA GCACACGGTG GCCTACCAGC ACGAACGGTA CGGCTTCACC
TGGTCCCCGG AATCGCGGCG TTGGCAGGTC CTGCTGGACG GCACTCCAAT GACCTCGGCC
GGAGCCGGTC CGGTGAGTGC CGCCACGGTG GTCGTGCAGC GGGTGGACAT CGCCGCGAAC
GAAGGGGTGC GCGATGCGGC CGGTGCCCCG TCGCCCGTCG TGCGGACCGT CGGTACGGGA
CCGGCGACGG TCCTCCGTGA CGGCCGGGCC TTCGAGGGCA CGTGGTCGCG ACCCTCGCCG
GAGGACGGCA CTCAGTTCAC CACCGGGTCC GGGCAGCCGT TACCGCTGGC CGAGGGGCCG
GTCTGGGTGC TGCTGGTGCC TCGGTGA
 
Protein sequence
MPTRPRRGLW AVLAVALCAA LVAITWVVTS DGDSERSTST SRPPPGTARS DVPSEPPAGS 
VPITVVKIDN VRSARPQTGL DIADVVYVEP VEGGYTRLAV VYSSELPDVA GPVRSARETD
VELLAQYGNP SLVFSGAAPE IEPVLAESEV RLVRHSDYPD AFYREPGRPS PHNLYARLPL
LPRVDGPGPE QVLPRGDTPP GGRPIAEHTV AYQHERYGFT WSPESRRWQV LLDGTPMTSA
GAGPVSAATV VVQRVDIAAN EGVRDAAGAP SPVVRTVGTG PATVLRDGRA FEGTWSRPSP
EDGTQFTTGS GQPLPLAEGP VWVLLVPR