Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22930 |
Symbol | |
ID | 8387617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2465277 |
End bp | 2466263 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644976346 |
Product | hypothetical protein |
Protein accession | YP_003134128 |
Protein GI | 257056296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.459753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.37663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACTC GACCACGCCG TGGACTGTGG GCGGTTCTCG CCGTGGCACT CTGTGCCGCG CTGGTCGCCA TCACCTGGGT GGTGACGTCC GACGGGGATT CGGAACGGTC CACGTCGACA TCGCGGCCCC CACCCGGCAC GGCACGGTCC GACGTCCCAT CGGAACCACC GGCCGGTTCG GTCCCCATCA CCGTCGTGAA GATCGACAAC GTGAGATCGG CGCGCCCGCA AACCGGCCTG GACATCGCCG ATGTCGTCTA CGTCGAACCG GTCGAGGGTG GATACACCCG GCTGGCGGTC GTGTACTCGT CGGAACTGCC CGACGTCGCC GGACCCGTGC GCAGTGCGCG GGAGACCGAT GTCGAACTGC TGGCCCAGTA CGGGAACCCC TCACTGGTGT TCTCCGGAGC CGCGCCCGAG ATCGAGCCCG TGCTGGCCGA ATCGGAGGTC CGACTCGTGC GGCACAGTGA CTACCCCGAC GCGTTCTACC GCGAACCGGG TCGGCCCTCG CCGCACAACC TGTACGCGCG CCTCCCCCTG CTGCCCCGGG TCGACGGGCC GGGACCCGAG CAGGTGCTGC CACGTGGCGA CACACCCCCG GGTGGGCGGC CGATCGCCGA GCACACGGTG GCCTACCAGC ACGAACGGTA CGGCTTCACC TGGTCCCCGG AATCGCGGCG TTGGCAGGTC CTGCTGGACG GCACTCCAAT GACCTCGGCC GGAGCCGGTC CGGTGAGTGC CGCCACGGTG GTCGTGCAGC GGGTGGACAT CGCCGCGAAC GAAGGGGTGC GCGATGCGGC CGGTGCCCCG TCGCCCGTCG TGCGGACCGT CGGTACGGGA CCGGCGACGG TCCTCCGTGA CGGCCGGGCC TTCGAGGGCA CGTGGTCGCG ACCCTCGCCG GAGGACGGCA CTCAGTTCAC CACCGGGTCC GGGCAGCCGT TACCGCTGGC CGAGGGGCCG GTCTGGGTGC TGCTGGTGCC TCGGTGA
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Protein sequence | MPTRPRRGLW AVLAVALCAA LVAITWVVTS DGDSERSTST SRPPPGTARS DVPSEPPAGS VPITVVKIDN VRSARPQTGL DIADVVYVEP VEGGYTRLAV VYSSELPDVA GPVRSARETD VELLAQYGNP SLVFSGAAPE IEPVLAESEV RLVRHSDYPD AFYREPGRPS PHNLYARLPL LPRVDGPGPE QVLPRGDTPP GGRPIAEHTV AYQHERYGFT WSPESRRWQV LLDGTPMTSA GAGPVSAATV VVQRVDIAAN EGVRDAAGAP SPVVRTVGTG PATVLRDGRA FEGTWSRPSP EDGTQFTTGS GQPLPLAEGP VWVLLVPR
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