Gene Svir_22300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22300 
Symbol 
ID8387554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2399620 
End bp2401047 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content69% 
IMG OID644976283 
ProductMg-chelatase subunit ChlI 
Protein accessionYP_003134065 
Protein GI257056233 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.102515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.184518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCG TTCCGGCGTC GTCACGGCCT GAGCCGCATC CCCCGGTCGA CCTCCCCCGC 
ACCGCGGGTG AGTTGCGTGC CGCCGGGTAT CGACCACGCA CCGTCAAAGC CGAGATCAAG
GACAATCTGC TCACCGCGTT GCGCGCGGGC CGGGACCCGT GGCCGGGCAT CGTGGGGTTC
TCCGACACCG TGGTGCCACA ACTGGAGCGG GCATTGCTCG CCGGCCATGA CGTCGTGCTG
CTCGGTGCGC GCGGACAGGG CAAAACCCGG TTGGCGCGGA CGCTGGTGGG GTTGCTCGAC
GAATGGACGC CGGTGATCGA GGGTTCCGAA CTGGCGGAAC ATCCGCTCGC ACCCATCACG
CCCGCCTCGC GCAGACGTGC CGCCGAACTC GGGGACGACC TCCCTGTCAC ATGGCTGCAC
CGGGACGCCC GCTACACCGA GAAACTCGCC ACCCCGGACA CCTCCGTCGG GGATCTCATC
GGCGACGTCG ACCCGGTCAA GGTCGCCGAG GGGCGCAGCC TCGGTGACCC GGAGACGATC
CACTATGGGC TCGTCCCGAG GGCACACCGC GGGATCGTGA CGATCAACGA GTTGCCCGAC
CTCGTCGAGC GTATCCAGGT GGCGTTGCTG AACGTCATGG AGGAGCGTGA CATCCAAATC
CGGGGATACA CGCTGCGTCT CCCGCTGGAC GTGCTGCTGG TGGCCACGGC CAACCCGGAG
GACTACACGA ACCGAGGACG CATCATCACC CCGCTGAAGG ACCGTTTCGG GGCGGAGATC
CGCACGCATT ACCCCCTCGA CGTCGCCGCT GAGGTGGCGA TCGTCAAGCA GGAGGCGCGT
CTGGTGGCGG AAGTCGGTGA CGAACTGTTG TCCGTACTCG CCCGGTTCGT GCGGTATCTG
CGCTCCTCCA CGGTCGTGGA CCAGCGTTCC GGGGTGTCGG CGCGGCTCGC CGTCGCGGCC
GCCGAGACCG TCGCCGCGGC GGCGCTTCGC CGATCCGCGT TGACGGGGGA ACAACCGGCC
GTGGCCAGGC CCGTGGATTT GGAGACCGTG CTCGACGTGG TGCGCGGCAA ACTCGAGTTC
GAGCCGGGGG AGGAAGGGCG CGCAACCGAG CATGTGACTC ATCTGTTGCG CCGTTCCGTC
GCCGAGACCG CCGATGACGT CTTCGCGGGG CTGGATCTGC GGCCGCTGGC CGACGCGGTG
GCGGACGGGA ACCTCGTCGC CACGGGTGAA CGGGTGACCG CCGCCCAGGT GCTCGAGGCG
CTTCCCGAGT TACCGGTCGT GCACGAAGTG GCGCAGCGGT TGGGTGTGTT GTCCGACGAA
CCCTCGCCTC GGCTCGCGGC CGCTGTGGAG TTGGCTTTGG AGTCGTTGTA TCTGGCCCGG
CGATTGGCCA AGGACATCGA CGGTGGCACC GCGGTGTACG GACCGTGA
 
Protein sequence
MGTVPASSRP EPHPPVDLPR TAGELRAAGY RPRTVKAEIK DNLLTALRAG RDPWPGIVGF 
SDTVVPQLER ALLAGHDVVL LGARGQGKTR LARTLVGLLD EWTPVIEGSE LAEHPLAPIT
PASRRRAAEL GDDLPVTWLH RDARYTEKLA TPDTSVGDLI GDVDPVKVAE GRSLGDPETI
HYGLVPRAHR GIVTINELPD LVERIQVALL NVMEERDIQI RGYTLRLPLD VLLVATANPE
DYTNRGRIIT PLKDRFGAEI RTHYPLDVAA EVAIVKQEAR LVAEVGDELL SVLARFVRYL
RSSTVVDQRS GVSARLAVAA AETVAAAALR RSALTGEQPA VARPVDLETV LDVVRGKLEF
EPGEEGRATE HVTHLLRRSV AETADDVFAG LDLRPLADAV ADGNLVATGE RVTAAQVLEA
LPELPVVHEV AQRLGVLSDE PSPRLAAAVE LALESLYLAR RLAKDIDGGT AVYGP