Gene Svir_22230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22230 
Symbol 
ID8387547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2390565 
End bp2391395 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID644976276 
Productpredicted phosphohydrolase 
Protein accessionYP_003134058 
Protein GI257056226 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.484241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.7287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGC CTAATCTGTA TGCCACCAGC GATCTACACG TCACCCACCG GGGTAATGAG 
CCGTTCGTGG ATCAGATCCG CCCCGAGACC TCCGAGGACT GGCTGATCGT GGCGGGTGAT
GTGGCGGAGA GGATGGGCAC GGTCGTCGAT ACGCTCGCGC GGTTGCGGGA GCGATTCGCG
ACCGTGGTGT GGGTTCCCGG CAACCACGAG TTGTGGACCA CTGCCAAGGA CCCCGACCAG
CATCGGGGTG AGGAGCGTTA TCGAGAGCTG GTGGACCGCT GTCGGGGGAT CGACGTCGTC
ACACCCGAGG ACGAATTCCC CGTGTGGCCG TACGCGGACA AGCCGCTCAC GGTGGCGCCG
CTGTTTTTGC TCTACGACTA CAGCTGGCGG ACCCCGAGGG CGGAGGGGGT GCCACTGTCC
GAGGCGCTGC GGCAGGCGAG GGAAGCGGGA GTGGTGTGCA CCGACGAGTA CCTGCTGCAC
CCCGACCCCT ACCCCAGCCG GCAGAAGTGG TGCTCCCAGC GGCTCGAATA CAGCGAGAAA
CGCCTGGTCG ACATCCCCTC CGATCACGGT ACGGTCCTCG TCTCACACTG GCCGCTGCAC
CGGCATCCCA CCGAGCCGCT GTACTACCCC GAGTTCGCTC TGTGGTGCGG CACCGAGGAG
ACCAACGACT GGCACGTGCG TTACCGCGCG GAGGTCGCCG TGTACGGGCA TCTGCACATT
CCGCGTACCA CCTACCGTGA CGGGGTGCGC TTCGAAGAGG TGTCGCTGGG ATACCCGCGT
GAGTGGAGCC GGCGTGCGCG GGGCGCGGTG CCCATGCGGC GCGTGCTGTG A
 
Protein sequence
MDVPNLYATS DLHVTHRGNE PFVDQIRPET SEDWLIVAGD VAERMGTVVD TLARLRERFA 
TVVWVPGNHE LWTTAKDPDQ HRGEERYREL VDRCRGIDVV TPEDEFPVWP YADKPLTVAP
LFLLYDYSWR TPRAEGVPLS EALRQAREAG VVCTDEYLLH PDPYPSRQKW CSQRLEYSEK
RLVDIPSDHG TVLVSHWPLH RHPTEPLYYP EFALWCGTEE TNDWHVRYRA EVAVYGHLHI
PRTTYRDGVR FEEVSLGYPR EWSRRARGAV PMRRVL