Gene Svir_22040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22040 
Symbol 
ID8387528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2373268 
End bp2373459 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content65% 
IMG OID644976257 
ProductProtein of unknown function (DUF797) 
Protein accessionYP_003134039 
Protein GI257056207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00887509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG AGCGTATCGA GAAGCACGGT GGTGGAGATT CCGACGACGT CGAGGCCGCT 
GCCCCTGCGG GCCAGGAGCG TCGGGAGAAG GTCGGCGAGG ACGTGGACAC GATCCTCGAC
GAGATCGACG ACGTGCTGGA GGAGAACGCG GAGGACTTCG TGCGTGCCTA CGTTCAGAAG
GGCGGCGAGT AA
 
Protein sequence
MAQERIEKHG GGDSDDVEAA APAGQERREK VGEDVDTILD EIDDVLEENA EDFVRAYVQK 
GGE