| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21840 |
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| Symbol | |
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| ID | 8387508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2352373 |
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| End bp | 2353056 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976237 |
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| Product | ABC-type antimicrobial peptide transport system, ATPase component |
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| Protein accession | YP_003134019 |
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| Protein GI | 257056187 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.908882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0444961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCACG AACACATCGG CCCCGACCGT CGGGAAGGGA CGCCCGCCGT GCGCGCGGTG
GGGCTGCGAC GTCGCTTCGC CCGTTCCGGC GGTGTGGACG TGCTGCGGGG CGTCGAGCTG
CACGCCGATC CGGGGGAGAT CGTGGCCATC ACAGGGCGAT CCGGGTCGGG CAAGACGACC
CTGCTGGCGC TGTTGTCCGG CTTCGACACC CCGGACGAGG GCACGGTGAC CTTCACCGGC
GAACCCGCCG CCGACGTGCC GTGGTCGGTG TGCGCGGTAC TGCCACAGGC GCTCGGTCTG
GCGGCCGAGC TGACCTGCGC CGAGAACGTC GCACTGCCGC TGCGGCTCCG CCGCACCCCG
CCCGACGAGG TCGAGACCAC GGTCACGGAC CTGCTGGACG AGCTGGGACT GGCCGACCTC
GCCGATCATT ACCCCGCAGA GTTGTCGTTC GGACAGCAGC AACGGGTGGC GCTGGCGCGG
GCCGTGGGTG TCCGACCGTC AGTGCTGTTG GTCGACGAGC CCACCGCCCA CCTCGATCCC
GACTCGGCAC AGGTGGTGTT GGCACTGCTG CGACGCGTCG CCGACGAGGG TGCCGCCATC
GTGGTCGTCA CCCACGATCC CGTGGTACTC GAGGTGGCCG ACCGGCGCCT CCGCCTCGAG
GACGGTGTGC TCGTACCCGC CTGA
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| Protein sequence | MTHEHIGPDR REGTPAVRAV GLRRRFARSG GVDVLRGVEL HADPGEIVAI TGRSGSGKTT
LLALLSGFDT PDEGTVTFTG EPAADVPWSV CAVLPQALGL AAELTCAENV ALPLRLRRTP
PDEVETTVTD LLDELGLADL ADHYPAELSF GQQQRVALAR AVGVRPSVLL VDEPTAHLDP
DSAQVVLALL RRVADEGAAI VVVTHDPVVL EVADRRLRLE DGVLVPA
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