Gene Svir_21060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21060 
Symbol 
ID8387430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2258109 
End bp2258594 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID644976164 
Producthypothetical protein 
Protein accessionYP_003133946 
Protein GI257056114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0574824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.342394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGA CGATTCCGGT GCCGATTCAG TTCTCCCTCC CGGAGGGGTG GATATCGGTC 
AACCCGGACG AGATCAACAC TCCGGAAGCC GCGTTCGTCG CGTTGCACCC CGGTCACCGC
GGTGGTGGTT TCACTCCCAA CATCACGATC ACCGGTGAGC TGCGGGACGC CACCGTTTCG
TTGCAGCAGA TCGCGGCGGA GTCCGTCGAC CGGCTGCGGA AGGGTGCGCA CGAGGTGAAG
ATCGGCCGCA CCACCGAAGG CGGTACCGCG GAGAACCCGG TCTACACCCA GGCGGTCCGC
CTGCACGTGG ATTTGGCCGG TCAGCCGCAG TACCTGGTGC AATACCAGGT GTTCATGGGG
TTCTCCGATA CCGCCAACCC GGCCAGGAGA GCGGTGCTGC AGATCGTGCT GACCTCCAAA
TTGGAGCAGT TCCCGCAGGT GATCGACGAT TTCCAGACGT TCATCGCGTC CATTCGGCCG
GAATGA
 
Protein sequence
MATTIPVPIQ FSLPEGWISV NPDEINTPEA AFVALHPGHR GGGFTPNITI TGELRDATVS 
LQQIAAESVD RLRKGAHEVK IGRTTEGGTA ENPVYTQAVR LHVDLAGQPQ YLVQYQVFMG
FSDTANPARR AVLQIVLTSK LEQFPQVIDD FQTFIASIRP E