Gene Svir_21050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21050 
Symbol 
ID8387429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2257566 
End bp2258081 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content70% 
IMG OID644976163 
Producthypothetical protein 
Protein accessionYP_003133945 
Protein GI257056113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0401798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.348603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA CGGCCAAGCG GCTCTTGCGG CGCGTGGAGG CGATCGACGC GGCCGCCGCG 
GAGAACCGCG CACGTGCGGA GCAGTACCGA CAGATGACCG AGAAGCTGGC CGCCGTCACG
GGCACCGCCA CCTCGCCGGA CGGGGTGGTG ACCGTGGTCG CCGGTCCGGA CGGCTCGGTC
AAGGAGGTCA CCTTCTCCGA GCAGGTGCGC AAGGCGGACC CGGCGGCGCT GTCCGCCAGC
GTGGTGCACA CCATCGCGCA AGCCCGTGTC AACGCGACCC GGGAACAGGC GGAGATCATG
CGTCGGAACC TCGACGACAC CCATCTGCTG GACCAGGTGT TGGCCGAGGA CGCCCGGTTG
TTCGGGGACA AGCAGCCGGA GGACCCCGGT CCTCCGCCAC CGGCGGCGGT CCCGACCGGC
GGCACTCCGG CCGGTCGACC CCGTACGCAG CCTGCCCGTC AGGCGTACAA CGACGACGAC
AGTTTCGAGG ACTTCCAGGT CCTCCGTCGA TCGTGA
 
Protein sequence
MSETAKRLLR RVEAIDAAAA ENRARAEQYR QMTEKLAAVT GTATSPDGVV TVVAGPDGSV 
KEVTFSEQVR KADPAALSAS VVHTIAQARV NATREQAEIM RRNLDDTHLL DQVLAEDARL
FGDKQPEDPG PPPPAAVPTG GTPAGRPRTQ PARQAYNDDD SFEDFQVLRR S