| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20490 |
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| Symbol | |
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| ID | 8387376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2185716 |
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| End bp | 2187728 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976110 |
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| Product | uncharacterized RAMP superfamily protein probably involved in DNA repair |
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| Protein accession | YP_003133892 |
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| Protein GI | 257056060 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGA CTTTCGTCAA TCCCTACACC TTCGTTCCCT TTCCCGATGC CCCGCCCAAC
CGCGCTCGCC CCCACGGACA CGCCGGTCGA TCGGAGTTGC TGTCCGGCAC GCTGAAAGTG
ACCATCCACA CCGAAACCGG GGTTTTGATC CGCGGTTTCG GCACTGAGGA AACACCCGAC
GTGCCCCGAC GAGCCGACGG CACCCCGTTC ATCCCCGGGT CGTCGTTGAA AGGGGCGCTG
CGGTCCCTGC ACGAGACGAT CACCGGCGGT TGTCTGCGGG TGTTCGACAG CGATTTCGTG
CCGGGCTACC GGGATTCGGT CACCGTCAAC ACCACCCGGG GACTGCGGAT GGCGATCGTG
GCCGAACACG TCAGCGAAGA CGTTCCACCC ACGCTGCTGG TGTGTCCGGA CGAGGACGAT
CCACCGACGC TGCACCACGA TCTGCTCGTG CGGGCAGCGG GTGGCGGTCC CCCGTTGAGA
TCCGGCGAAC GGCTGGCCGT GACCTTCACC CGGGGAAGAC CCGACGCGGC GTACCGCGAC
GACGAGGGCG AGTGGGTGGT GTTCATCAGC GACGCCAAGG TCCGCGACGC CGCCGGCGGC
AGGAAGCGCA ACTACAGGGC CCAGTTGCGC CGCTACCCGG TCGGCGCGGT TGCGCGGGCC
GTTCCCGACG AGGTGTGGCA GGACTTCCTG CATGCCGTCG ACGGCGCCGA CGACCTGCGC
ACCGCGCAGC TCGCCAAGCG CAACCCCGAC GACGTCTTCG CGGACGTCAC GTTCCAGGGC
AGGGTCATCG GCCAACGCCA CTACGCCAGC CGTCGCCTGC ACGAAGGCCA GCCGGTCTGG
GTGCGGCTCG ACTCCGACGG CGAGATCGAG TCGCTGCGAC TGTCCATGAT CTGGCGTCAT
CCGGGCAGCG TCTCCGCGGG CGAACGCGTC GATCCGGGAT TCCACGCCTG CCGAGAGTGG
GAGAGCCTGT GTCCGAGCTG TCAGGTGTTC GGCTCGGCCG ACACCGAAGG CAAGGACACC
CCTAAGGCCC GGCAGAACTC CTACCGCGGG CATGTGCGGT TCTCCGACGC GGTGCTCGTC
AAACGCGCCA AGTCGAAGAA AAAGAAGGGC GGCGCGGGCA AGGACAGCGC GATCGCGACG
CTCAAGCTCG CGCCCTTGGG AACTCCCAAG CCGGGATCGG GACAGTTCTA TCTCGTCAAC
GACGAGCGAG TTCGAGGAAA CGCCGGTACC CCGCCGCTGC GGGAATGGGG TTCGGCCGCC
GACTTGCCAC GACCACGCCG ACTTCGAGGG CGCAAACACT ACTGGCACAC CGAACTGGGA
AGCTCACCAC AGACCTACCG CGCCAAAGCA CGCCCCCACC ACAGCAGTGA GCTGACCACC
GATGTCGCCT TCCTCCGGAA GGGCAACACG TTCAGCGCCA CGCTCGTCTT CACCGACTTG
GACGAGATCC AACTCGGCGG GCTGTTGGCG GCGCTGCAAC CGTCGACCCT GTTGGGCGAG
GAGAAGGTGT GGCAGCACAT CGGCGGCGGA AAGCCGTTCG GGTTCGGCGC CTGCACCCTC
ACCATCGACC CTTCGGGCAG CGACGTGTGG CGCACCGGAG CCCGTTACGG CGTTTCCTGC
CCGCCCGCCA AGCTCGACGT GGAGGCGTTG ATCGGCCAGT TCCGGGAATG GATGGAGCGG
CACTGCCCCG AGGTGGTCCA GACCTGGCCG CTACTCGCCA AGGCGCTCAA ACCCGACACC
GTCAAAGCCG ACAAGGTCTG GTATCCGCCG GGTGACTCGT CGTCCTCCCC CGCGCAGGCG
TCCGAGGCGT TCGACACGGG GTTCGCGTTC TGGCAGCAGA CATCGGGCAC CGAGTATCAG
AAGAAGAACG GCAAACGCCG CGGGAACCCG CTGATGGCCC TGCCCGATCT CGCGGACGAC
GACCAGGAGC TGCCGATCAT CGACAAGGCC GACGAGTGCG ATCTGCCCAA TCAGCAACGA
CTTCCCGGCA ACCCGCGGGG AGGCAGGCGG TGA
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| Protein sequence | MAGTFVNPYT FVPFPDAPPN RARPHGHAGR SELLSGTLKV TIHTETGVLI RGFGTEETPD
VPRRADGTPF IPGSSLKGAL RSLHETITGG CLRVFDSDFV PGYRDSVTVN TTRGLRMAIV
AEHVSEDVPP TLLVCPDEDD PPTLHHDLLV RAAGGGPPLR SGERLAVTFT RGRPDAAYRD
DEGEWVVFIS DAKVRDAAGG RKRNYRAQLR RYPVGAVARA VPDEVWQDFL HAVDGADDLR
TAQLAKRNPD DVFADVTFQG RVIGQRHYAS RRLHEGQPVW VRLDSDGEIE SLRLSMIWRH
PGSVSAGERV DPGFHACREW ESLCPSCQVF GSADTEGKDT PKARQNSYRG HVRFSDAVLV
KRAKSKKKKG GAGKDSAIAT LKLAPLGTPK PGSGQFYLVN DERVRGNAGT PPLREWGSAA
DLPRPRRLRG RKHYWHTELG SSPQTYRAKA RPHHSSELTT DVAFLRKGNT FSATLVFTDL
DEIQLGGLLA ALQPSTLLGE EKVWQHIGGG KPFGFGACTL TIDPSGSDVW RTGARYGVSC
PPAKLDVEAL IGQFREWMER HCPEVVQTWP LLAKALKPDT VKADKVWYPP GDSSSSPAQA
SEAFDTGFAF WQQTSGTEYQ KKNGKRRGNP LMALPDLADD DQELPIIDKA DECDLPNQQR
LPGNPRGGRR
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