Gene Svir_20140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20140 
Symbol 
ID8387341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2147107 
End bp2147562 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID644976077 
ProductPolyketide cyclase / dehydrase and lipid transport 
Protein accessionYP_003133859 
Protein GI257056027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.419152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0130791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTGG GCGTGATGAT CGAGGTGGAC CGTGTGATGC CGGTGGACCC GGACCGGGTG 
TACGCGGTTT TGTCCGACGG CTGGTCCTAC GCGGGGTGGG TGGTCGGCAA CGCGCATATC
CGCGACGTGG ACGACTCCTG GCCCGCCGAG GGCAGCCGCA TCCACCACAA GGCGGGGATG
TGGCCGGTGC AGGTACCGGA CATCTCCACG GTGACGGCGG TGTCACCGGG ACGCATGGTC
GAGTTGGAAG CGCGGCTGTG GATTCTCGGC CGAGCGCGTG TCCGGGTCAC CTTGGCCCCG
GAGGACGGAC GAGGTACGCG CGTCCGCCTG TCCGAGGAGA TCGTGAGCGG GCCGATGGGA
CTGTTGCCGG AGTCGGTGCA GGCGTTGTTG TTGCGGCCCC GCAACACCGA GGCGCTGTCC
AGATTGGAGG ACATCGTGGT CGGCAAGACG TCGTGA
 
Protein sequence
MEVGVMIEVD RVMPVDPDRV YAVLSDGWSY AGWVVGNAHI RDVDDSWPAE GSRIHHKAGM 
WPVQVPDIST VTAVSPGRMV ELEARLWILG RARVRVTLAP EDGRGTRVRL SEEIVSGPMG
LLPESVQALL LRPRNTEALS RLEDIVVGKT S