Gene Svir_18650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18650 
Symbol 
ID8387192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1977762 
End bp1978814 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID644975932 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003133714 
Protein GI257055882 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.303619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGC GAACCGTGAC CGCGAACGGT CAGCGTTTCC ATTACGCCGA ACAAGGAGAG 
GGACCCCTGG TCCTGCTCCT GCACGGATTC CCGGAGTCAT GGCATTCCTG GAGTCACCAG
ATCCCGATGA TCGCCGAGGC CGGCTACCGT GCCGTCGCCC CGGACCTCCG CGGATACGGT
AGGTCGTCGA AACCACGTCG GGTCGACGAC TACCGGATCA CCGAGCTCGT CGCGGACTGT
GTCGGTCTCG TCGAGGCGCT GGGGGAGACC GAGGCGGTGG TGGTCGGTCA TGACTGGGGC
TCCATGTTGG CGTGGACGGC CGCCTGGACC CGGCCGGACG TCTTCCGCGG GGTCGTCGGG
CTCAGCGTCG CCTTCGGCGG CCGCGGACTG CTCCCCGTGG CGGGTGTCAG TTCGCTGGGT
GAACTACGGC CCAGCGAAGT GCACCGTGTC ATCGCCGGCC CGGACAAGGC GTTCTACCAG
GAGATCTGGA TCGACGGCGA AGGATTGGCC GCCGAGGCGG AGGAGGACAT GTACACCTTC
TTCCGCGACC AGTTCCACAG CTTCTCCGGC GATGTCTACC CCGCCGACCA CCAACCCCCG
AACGTCCTGA CGATCTCGCC CGAGGAGGTT TTGGAGTTCA CCCGGGCCAG CGGCGCGGTG
GTCGACCGGG GAAGCCGGTT CCGCTCGGGC CTGGTCAGCC CGGAGACGCT CCCCGAATGG
TTGGCGAGGG ACCTCGACTT CTACGTCGCC GAGTACGAAC GTACGGGCCT GCATCACGCC
CTGAACTGGT ACCGCTGCAT GGACCTGGAC TGGGAACTGC TCGCCCCATA CGAGGGCAGG
CCGATCGAGG TCCCGGCGAT GTTCATCGGC TCCGACCTCG ATGTCGCGAC GCTGTGGGGA
GCCGAGGCCA TCGCCAACTT CCCCACGACG GTTCCCCGAC TCACCGAAAC CGTGATCCTC
GAACGCTGCG GGCACTGGAT CACCAGGGAG GCCCCGGTCG CGACTGGGGA GGCGATCGTC
CGTTTCCTCC GAACCCTCTC GTCGGCGAAG TGA
 
Protein sequence
MLQRTVTANG QRFHYAEQGE GPLVLLLHGF PESWHSWSHQ IPMIAEAGYR AVAPDLRGYG 
RSSKPRRVDD YRITELVADC VGLVEALGET EAVVVGHDWG SMLAWTAAWT RPDVFRGVVG
LSVAFGGRGL LPVAGVSSLG ELRPSEVHRV IAGPDKAFYQ EIWIDGEGLA AEAEEDMYTF
FRDQFHSFSG DVYPADHQPP NVLTISPEEV LEFTRASGAV VDRGSRFRSG LVSPETLPEW
LARDLDFYVA EYERTGLHHA LNWYRCMDLD WELLAPYEGR PIEVPAMFIG SDLDVATLWG
AEAIANFPTT VPRLTETVIL ERCGHWITRE APVATGEAIV RFLRTLSSAK