Gene Svir_18270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18270 
Symbol 
ID8387154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1896260 
End bp1897264 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID644975895 
Producthypothetical protein 
Protein accessionYP_003133677 
Protein GI257055845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAG TCGACACGAA CGATCTCGGC CAGCTCACGG GCATCCTCGC CGTTGACGTA 
CGCCGCTTCA GCAGGCACAA CGACATCCAG CAGAAACAGA TCGGGACGCT GCTGCCCGTC
GTTCTGCATG AAGCCGCGGA GCGTGCCGGG TTGGACGAGA TCATGCGGAG CACCGTGTTT
CATGCCTTTC GGGGAGACGG CTATCTCATC GGTTTCGACC CGGGCCGAGT GACCGACGTT
GTGGACCGGT ATTTCGACTC ACTGCAGGCC GTGCTTCGGT GTCGCTCCCC AGAACTGCGC
GCGGCCGAGA TCGAGCTGCG CCTGCGGGTG AGCCTGCACC TCGGCCCACT GCAGTCCTTC
GACAAGCTGG TGGCCGATTC TCCGACGGGA AGGGTGATGG TGGAAAGCGG CCGGATGGTC
GATGCGGATC CGGTGCGGGC GTTGCTCGAC CATTCGGATC CCAATGTCAC GCTCGTGGCC
GCGGTGCTGT CGGAAGAGGT CATGAAGAAT GTGATCGAGG CCGGGCGCAC CGCTCGAAGG
CCGAGTGAGT TCGTCGCAGC ACCGCTGCGG ATCGATGCGA AGGACTACTC CGGGACTGGT
TACTTGCGAG TTCCCGTTCC CTCCGGTGAC CTGCTTCGGT ACGGGCTGTT GTACGGTCAG
CCCGAGCAAG CTACCGACGA CGAGCAGGAC AGCGAAGAGA GGTCGACTCG CTCCGAGGGG
GCCGGGGGCA ATACGTTCAA CGGAAGCGCG CCAAATGCGC GGCAGATCGG GTATGTAAGC
GGCGGATTCA GCGACAATTC TGTTCAGAAC ATTGTCTCGG GAGACTCTGT TCACAATTCC
GTCTCGGGCA ACGGGAACAA CATTGCAGGG GGAGACATCA ACACAGCTCC CCACACAGTC
GTCGATCAGG TGTACTCGGG ATTCTTCAAC ACCCAAGGCG ACTCCAACTT CGGTCCGTCG
AGCGGCCGCC GCATCAACGA GAGCGGCGTT GCTGAGGGCC GGTGA
 
Protein sequence
MIQVDTNDLG QLTGILAVDV RRFSRHNDIQ QKQIGTLLPV VLHEAAERAG LDEIMRSTVF 
HAFRGDGYLI GFDPGRVTDV VDRYFDSLQA VLRCRSPELR AAEIELRLRV SLHLGPLQSF
DKLVADSPTG RVMVESGRMV DADPVRALLD HSDPNVTLVA AVLSEEVMKN VIEAGRTARR
PSEFVAAPLR IDAKDYSGTG YLRVPVPSGD LLRYGLLYGQ PEQATDDEQD SEERSTRSEG
AGGNTFNGSA PNARQIGYVS GGFSDNSVQN IVSGDSVHNS VSGNGNNIAG GDINTAPHTV
VDQVYSGFFN TQGDSNFGPS SGRRINESGV AEGR